Pontibacillus sp. ALD_SL1: IMZ31_00020
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Entry
IMZ31_00020 CDS
T09942
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMZ31_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pona03400
]
IMZ31_00020 (recF)
DNA repair and recombination proteins [BR:
pona03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IMZ31_00020 (recF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_27
DUF2813
AAA_21
AAA_29
ABC_ATPase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QST00076
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Position
3044..4162
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AA seq
372 aa
AA seq
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MHLEQLTLKHYRNYEHLDITFDDKVNVIIGENAQGKTNLMEAIYVLAFAKSHRTPRDKEL
IMWDQEYAKIKGSVFKRKRHFPLEIVTSTKGKKAKLNHLEQKRLSDYIGALNIVMFAPED
LNLVKGNPQVRRRFIDMEIGQIQPAYIYHLGQYQKILKQRNHLLKEYQRKQKPDLTMLRI
LTDQLIEHAATIVQRRFKFLGLLRDWAMPIHEGISRQLEKLEIEYNPTAEVSKDMDLSML
VRVFQDKFQEIEKRELERGTTLIGPHRDDLIFYVNGKDVQTYGSQGQQRTTALSLKLAEI
ELIHSEVGEYPILLLDDVLSELDDYRQSHLLHTIQGKVQTFVSTTSVDGIEHETLRKADV
FYVQEGSVTRPN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagaacaactaactttaaaacactaccgtaactacgagcatttagatataaca
ttcgatgataaggttaacgttattattggtgagaatgctcaaggtaaaacaaatcttatg
gaagctatatatgttttggcttttgcgaaatcccatagaacccctcgggataaagaactt
atcatgtgggaccaagaatatgctaaaattaaggggagtgtgtttaagcgaaagcgccac
tttcctttggaaattgtaacgtccacaaaagggaaaaaggcaaagcttaaccatcttgag
caaaaacgtttaagcgattatataggcgcattaaatattgtcatgtttgcacctgaagat
ctaaaccttgtaaaaggaaatcctcaggttcgtcgtcgttttatagacatggaaattgga
cagattcagcctgcttatatttatcacttgggacagtatcaaaagattttaaagcaacga
aatcatttattgaaggaataccagcgcaaacaaaaacctgatttaacaatgctgcgaatc
ttaactgaccaactcatagagcacgctgcaacgattgttcaaagacgatttaagttttta
ggtctcctcagagattgggccatgccaatacatgaaggaattagtcgacagctagaaaag
cttgaaattgagtataatcctacagctgaagtatcaaaagatatggatttgtctatgctt
gtaagggtattccaagataaatttcaagaaattgaaaagcgggaactagagcgaggtact
actttaattggcccgcatcgtgatgatttaattttctatgtaaatggtaaagacgtccaa
acatatggttctcaagggcagcaacgtacaacagctctttctttaaaactggctgaaatt
gagttgatccatagtgaagttggagaatatcccattttgctgttagatgatgtattaagt
gaattagatgattatagacaatcccatctattgcataccattcaaggaaaagtccaaacg
tttgtatcaacaacgagcgtggatggcattgagcacgaaactttacgaaaagcggacgtt
ttttacgttcaagaaggtagcgttactaggccgaattga
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