Pontibacillus sp. ALD_SL1: IMZ31_00245
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Entry
IMZ31_00245 CDS
T09942
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03030
DNA replication
pona03430
Mismatch repair
pona03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMZ31_00245 (holB)
03430 Mismatch repair
IMZ31_00245 (holB)
03440 Homologous recombination
IMZ31_00245 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pona03032
]
IMZ31_00245 (holB)
03400 DNA repair and recombination proteins [BR:
pona03400
]
IMZ31_00245 (holB)
Enzymes [BR:
pona01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMZ31_00245 (holB)
DNA replication proteins [BR:
pona03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMZ31_00245 (holB)
DNA repair and recombination proteins [BR:
pona03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMZ31_00245 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
QST00112
LinkDB
All DBs
Position
48656..49642
Genome browser
AA seq
328 aa
AA seq
DB search
MNKWADMIEIQPMVTKMLTNSIQKDRISHAYLFQGSKGTGKLAMSLLFAKSFFCRFREGV
EPCQTCKDCIRIDSGNHPDVHVIQPEGQSIKKEQILHLQKEFTYTGLESNQKVYIVEDAD
KMTANASNRLLKFLEEPNRQTVAMLLTENGQALLDTIRSRCQIMAFQPLNTENVTKRLIE
EGVSESSARLLSALTNNIDGALEMNRDDWFANARKLVIQLIEVLQEKPSEALLFVNNQWM
PHFKDRDALNQGLDLLSLWFKDLVYEHVGMESSIVFITERERIRTSSYTWSKQFATNALT
HILEAKRKLISNVHPTLVMEQLTLQIQR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtgggccgatatgatcgaaattcagcctatggttacaaaaatgttaaccaat
agtattcaaaaagatcgcatctctcacgcttatttatttcaaggctcaaaggggacgggg
aagctagcaatgagtttattatttgcaaaaagcttcttctgtcgctttcgggaaggcgtg
gaaccttgccagacctgtaaagattgtatccgaattgactctggtaatcatcctgatgta
cacgttattcagccagaaggacaatcaataaagaaagaacaaattcttcatttacaaaaa
gagttcacctatactggattagagtcaaatcaaaaggtatacattgtagaagatgcagat
aaaatgacagctaatgcctctaatagattattgaagtttctagaagaaccaaatcgtcaa
acggtagcaatgctcttaacagagaacgggcaagcacttctagacacaattcgctctagg
tgtcagattatggcgtttcagccgctcaatacagaaaatgtgacaaagcgcttgattgaa
gagggtgtttcggagtcttcagctcgtttattaagtgccttaacgaataatatagatggt
gcgcttgagatgaatcgtgatgactggtttgcgaacgcgagaaagttagtgatacaatta
attgaagtccttcaggaaaaacccagtgaggctttattattcgtgaacaatcaatggatg
cctcattttaaagaccgagatgctttgaaccaaggtttagatcttctttccttatggttt
aaggatttagtgtacgaacatgtcggtatggagtcatctattgtttttattacagaaagg
gagcgcattcgtacaagctcctatacatggtccaagcaatttgcaacaaatgctctgacc
catattttagaggcaaaacgtaagctaatctcaaatgttcacccaaccctggtgatggaa
caactcacgcttcaaatacagaggtga
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