Pontibacillus sp. ALD_SL1: IMZ31_00870
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Entry
IMZ31_00870 CDS
T09942
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IMZ31_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pona03021
]
IMZ31_00870
03400 DNA repair and recombination proteins [BR:
pona03400
]
IMZ31_00870
Enzymes [BR:
pona01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IMZ31_00870
Transcription machinery [BR:
pona03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IMZ31_00870
DNA repair and recombination proteins [BR:
pona03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IMZ31_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
Nuf2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QST00216
LinkDB
All DBs
Position
158047..158991
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIELVEISDDATFGKLVVEPLERGYGTTLGNSLRRILLSSLPGSAVTSVQIEG
ALHEFSTVDGVVEDVTTIVLNLKQLALKIYSEETKTLEIDVSGQGAVTAADITHDSDVEI
LNPEIHIATLQSNANLRMKITAEKGRGYRPAEANKFDEQPIGVIPVDSIFTPISRVTYQV
ENTRVGQVTNFDKLTLDIWTDGSIRPEEAVSLGAKIYMEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAQKSEEDMMKVRNLGRKSLEEVK
HKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaaaaattgaactggttgagatcagcgatgatgcaacgttt
ggtaagttggtcgtcgaaccgcttgaacgtggatatggtacaacactagggaactcctta
cgtcgtattctattatcctcactaccgggctctgctgtaacctctgtccagattgaaggc
gcacttcatgaattttcaacagttgatggagtagtcgaagatgtaacaacgatcgtccta
aatcttaagcaactagctcttaagatttactctgaagagactaaaactttagagattgat
gtttctggacaaggagcagtaacagctgcagacatcacgcatgattctgatgtggagatc
ttaaaccctgagatccacattgctacgttacaatccaatgcaaatctgcgtatgaaaatt
acggcagaaaaaggacgcggctatcgtcctgcagaagcgaacaaatttgatgaacagcct
atcggcgtcatcccagttgattctatcttcactccaatttcacgtgttacctaccaagtg
gaaaacactcgtgtaggccaggtgacaaattttgataagcttacgttagacatttggact
gacggaagcattcgaccagaagaagcagtttcattaggtgctaaaatctatatggaacac
ttaaacattttcgttggactcactgatgaggcgcaaaacgctgaaatcatggttgagaaa
gaagaagaccagaaagaaaaagtccttgaaatgacaatcgaagaacttgatttatccgtg
cgttcttacaactgcctcaagcgtgcaggtatcaacacggtacaagaacttgcgcaaaaa
tcggaagaggatatgatgaaagttcgtaaccttggacgtaaatcccttgaggaagttaag
cataagctcgaagaacttggcttaggcttacgtaaagacgattaa
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