Pontibacillus sp. ALD_SL1: IMZ31_01360
Help
Entry
IMZ31_01360 CDS
T09942
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ31_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pona03019
]
IMZ31_01360
03009 Ribosome biogenesis [BR:
pona03009
]
IMZ31_01360
Enzymes [BR:
pona01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IMZ31_01360
Messenger RNA biogenesis [BR:
pona03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IMZ31_01360
Ribosome biogenesis [BR:
pona03009
]
Prokaryotic type
rRNA helicases
IMZ31_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QST01787
LinkDB
All DBs
Position
240918..242384
Genome browser
AA seq
488 aa
AA seq
DB search
MGFEEATPVQEQTIPLAMDGRDVIGQAQTGTGKTAAFGIPMIEKIDENMKKIQGLVIAPT
RELAMQVATELNKYGQYKGVKVLPVYGGTDMGRQIRSLKQQPQIVVATPGRLLDHIRRKT
IQLSNIHTAVLDEADEMLNMGFIEDIKDILKAVPMQRQTLLFSATMPKEIHEIATSMMKK
PETVKLKAKQMTVEKIDQYFIEVNDGKKFDTLTRLLDIHTPDLAIVFARTKKRVDEITEG
LSARGFRAEGIHGDLTQGKRMSVLKKFKRGGVEVLVATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKEGYAVSFITPREMAHLNLIEKTTGRKIDRLPIPSNDQALKGQQ
NIAIEKLVQSIESDNLESYESTAAELLEQHDSVSVIAAALKMLTKERKDVPVQLSYLAPV
STKQAHKDKQKRGGGGKRYNRNGNGGPKGKGGYNRNGKSGGGYNKSRSQGQNKGNRNRKY
QNSNRNNS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaggaagctacaccagtccaagagcagacaattcctcttgcgatggatgga
agagacgtgatcggtcaagcgcaaacaggtacaggtaagactgcagccttcggtattcca
atgatcgagaagatcgacgagaatatgaagaagattcaaggtctagttattgcgcctact
cgcgagctagctatgcaggtagcgacagagttaaataagtacggacaatataaaggtgtg
aaagtactgcctgtttacggtggtacagatatgggacgtcagattcgttcccttaaacaa
caacctcaaattgttgtagcaacaccaggtcgtctattagaccacattcgtcgtaaaaca
attcagctatccaatattcacacagctgttttagacgaagcagatgaaatgcttaacatg
ggcttcattgaagatattaaagatattcttaaagctgttccaatgcagcgccaaacatta
ctgttctcagccacaatgccaaaagagattcatgaaattgctacgagcatgatgaagaag
cctgaaacagttaagcttaaagcgaaacaaatgacggttgagaaaatcgatcagtatttc
atcgaagtaaacgacggtaagaaattcgatacgttaacacgtcttcttgatattcacacg
cctgacttagcgattgtattcgctcgtacgaagaagcgtgttgatgaaattacagaagga
ttaagcgcccgcggtttccgtgctgaaggaattcatggtgacctgacacaaggtaagcgt
atgagcgttctgaagaaattcaaacgtggtggggttgaagtactagtagcaacagacgtt
gcagctcgtggcctggatatctcaggtgttacacacgtatacaacttcgatatccctcaa
gatcctgaaagctatgtacaccgtattggtcgtacaggtcgtgctggtaaggaagggtac
gcagtttccttcatcacaccaagagaaatggctcaccttaacctaattgagaagactaca
gggcgtaagattgatcgacttccgattccatcaaatgatcaagctcttaaaggtcaacag
aacatcgcgattgagaaacttgttcaatccattgaatctgataaccttgagtcttatgag
agcacagcagctgaattactagaacagcatgattctgtatctgtaattgcagcagcgctt
aaaatgctaacgaaagagcgtaaagacgtacctgtacaactaagctaccttgcgccagtt
agtacaaagcaagctcacaaagataaacaaaaacgcggtggtggcggcaaacgctataac
cgtaatggtaatggcggtcctaaaggtaaaggcggctacaaccgtaatggcaaatctggc
ggtggttacaacaaatcccgttcacaaggccagaacaaaggcaaccgtaaccgtaaatac
caaaactcaaaccgcaataattcctaa
DBGET
integrated database retrieval system
