Pontibacillus sp. ALD_SL1: IMZ31_05795
Help
Entry
IMZ31_05795 CDS
T09942
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pona
Pontibacillus sp. ALD_SL1
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pona03019
]
IMZ31_05795
Messenger RNA biogenesis [BR:
pona03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IMZ31_05795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QST01077
LinkDB
All DBs
Position
1147194..1148174
Genome browser
AA seq
326 aa
AA seq
DB search
MTITDFKELNESGLYFDGYALVKSAQEATTKGGVPFFNITLGKQEKSISTKLWENKFNNH
DLAQLKRIFENGNVLHIKGKLSEYRDQLQLTIDEFAFPEEGVVQVEDYLESAPEPIESLR
EEYENYIANIESPVLKEICQRLYDEHKDKFITYPAAKSNHHCFTGGLLYHTVSMLRLGDH
ISGQYKEVKKDLVMAGIALHDMGKVVEYTNYFAPDYSKVGNFLGHITIINMFIDRKVQVL
KDEMQWTRKEADEVYELMHVINAHHGKLEYGSPVESKILEAEVVHQIDMMDSRINMITYG
LQDENLQENEAKRIFPMGLYYRTSQD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacgattacagattttaaagaattaaatgaatcaggactctattttgatggctacgcc
ctggtgaaatcagcgcaagaagcaacaacaaaaggtggcgtgccttttttcaatattaca
ttaggcaagcaggagaaaagtatttcaacaaagctttgggaaaataaatttaacaatcat
gatctggcgcagcttaagagaatttttgagaatggaaacgtgcttcacattaaagggaaa
ttgagtgaatatcgcgatcagcttcagttgaccattgatgagtttgctttcccggaagag
ggtgtggttcaggttgaagattatttagaatcagctccagaaccaattgaaagcttaaga
gaagagtacgagaattatattgcaaacattgagagccccgttctgaaggagatttgtcag
cgtctgtatgatgagcataaagacaaattcattacctatcctgcggcaaagtcgaatcac
cattgtttcacaggtggattgctatatcatacggtatcgatgcttcgcctgggtgatcat
atttccggtcagtataaagaggtgaagaaggaccttgttatggctggtattgcgcttcac
gatatggggaaagttgttgagtatacgaattacttcgctcctgactattctaaagtcggt
aatttcctgggacatattacgattattaacatgttcatcgatcgcaaagtgcaggtatta
aaagatgagatgcagtggacgcgtaaggaagctgatgaagtgtatgaacttatgcacgtg
attaatgctcaccacgggaagcttgagtacggaagtcctgttgagagtaagattctagag
gcagaagttgtgcatcagatcgatatgatggacagccgcattaatatgattacgtacggt
cttcaggatgagaacttgcaggaaaacgaagcaaagcgaattttcccaatggggctctac
taccgtacgtctcaggattaa
DBGET
integrated database retrieval system
