Pontibacillus sp. ALD_SL1: IMZ31_08655
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Entry
IMZ31_08655 CDS
T09942
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona02020
Two-component system
pona02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IMZ31_08655
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IMZ31_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pona03021
]
IMZ31_08655
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pona02035
]
IMZ31_08655
Transcription machinery [BR:
pona03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMZ31_08655
Bacterial motility proteins [BR:
pona02035
]
Flagellar system
Flagellar assembly proteins
Stator
IMZ31_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QST01609
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Position
1715327..1716103
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AA seq
258 aa
AA seq
DB search
MNNNSAPHEEQLWEKWHKERDIESGDELVKRYMHLVMYHVQRIAAHLPQSVHKEDIRSLG
LIGLYDALEKFDVTRDLKFDTYASFRIRGSIMDGLRKEDWLPRSIRDKSKRIEQTAEHLE
QFLQREVTSKEVADHLGMPEQEVDSIVKDTVFANLLSIEEKPKDTKDEHKEGIGYSLPDQ
NTITPHDQVIKEENYRDLAIGIKKLNDKEQLVVSLFYQEELTLTEIGQVMSLTTSRISQI
HARALFKLRKVLKDTISM
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaattcggctcctcatgaagaacaattatgggagaaatggcacaaggaacga
gatatagaatcaggagatgagcttgtgaagcgatatatgcaccttgtcatgtaccatgtg
caacgaattgctgctcatctgcctcaaagtgttcataaggaggatattcgaagtctgggg
ttaatcgggctttatgatgctcttgaaaaatttgatgtaacacgcgatttaaaatttgac
acatatgcttcatttcgtataagaggttccattatggatggtctcaggaaagaagattgg
ttgcctcgttctattcgtgataaatcaaagcgcatagagcaaacagcagaacatttagag
cagttcttgcaaagagaagtaacatcaaaggaagttgcagatcatttggggatgccagag
caggaagtcgattcgatcgttaaagacacagtctttgcaaacctcttatctattgaagaa
aaaccaaaagatacaaaagatgagcataaagaggggattggttattcattgccggatcaa
aacaccatcaccccacatgaccaagttataaaagaagagaattatcgcgacttagcaata
gggataaaaaagttaaatgataaagaacaattagtagtgagtttattctatcaagaagag
ctaaccttaacagagattgggcaagtaatgagtttaactacttctcgtatttctcaaatt
catgcacgtgctctatttaaattaaggaaggttcttaaagatacaataagtatgtaa
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