Pontibacillus sp. ALD_SL1: IMZ31_08770
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Entry
IMZ31_08770 CDS
T09942
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ31_08770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pona03019
]
IMZ31_08770 (pnp)
03016 Transfer RNA biogenesis [BR:
pona03016
]
IMZ31_08770 (pnp)
Enzymes [BR:
pona01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IMZ31_08770 (pnp)
Messenger RNA biogenesis [BR:
pona03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IMZ31_08770 (pnp)
Transfer RNA biogenesis [BR:
pona03016
]
Prokaryotic type
tRNA degradation factors
IMZ31_08770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
Ribosomal_L25p
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QST01881
LinkDB
All DBs
Position
1739447..1741564
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AA seq
705 aa
AA seq
DB search
MAEEKQVFSTEIAGRPLRIDIGELAKQASGACMVQYGDTSVLATATGSKEPKDLPFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFPDGFRNEVQVISTVMSV
DQDCSSEMAAMLGSSLALSISDLPFSGPIAGVIVGRVDGEFIINPTIEQQEKSDIQLTVA
GTKDAVNMVEAGADEVPEEVMLEAIMYGHEEIKRLVAFQEEVVEAVGKAKREITLFELDA
DIVAEVEGKAKDALVKAIQTEEKHARDEAITEVKNNVVAEYEEAEAESEKISQVKSVLDK
IVKEEVRRLITKEKIRPDGRKPEEIRSLSSRVGVLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLDLEESKRFMHHYNFPHFSVGETGPMRGPGRREIGHGALGERALEKVVPSEE
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEDYTVLT
DIQGMEDFLGDMDFKVAGTEKGVTALQMDIKIEGLSRSILEDALTQAKAGRKEILDSMIA
TIEQPREELSAYAPKILTMAIKPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGKIFISS
TDAAANRNAKQIIEDLVREVEVGETYLGTVKRIEKFGAFVELFKGKDGLVHISQLAEERV
GKVEDVVAIGDQLKVKVKEIDNQGRVNLSHKDVIIEEKKQQETTE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaaaacaagttttctccaccgaaattgctggccgccctttacgtattgat
attggagagttagctaaacaagcaagtggagcatgtatggtgcaatacggagacacatct
gttttagcaaccgcaacaggatctaaagagccaaaagacttgccgtttttccctcttact
gtaaattacgaagagagattatatgctgtaggtaaaattccaggtggatttattaagcgt
gaaggacgtccaagtgagaaagcagttcttgcttcacgtctaatcgaccgcccaatccgt
cctcttttccctgacggctttcgtaatgaagtacaagtaattagtacagtaatgagtgtg
gatcaggattgttcttcagaaatggcagcaatgttaggatcatcccttgcattgtctatt
tcggaccttccatttagcggtccaatcgcaggtgtaattgtaggtcgtgttgatggagag
tttatcatcaacccaacgattgaacaacaagagaaaagcgacattcaactaacagtagct
ggtacaaaagatgctgtaaacatggtagaagcaggagcggatgaagtacctgaagaagtc
atgttagaagcaattatgtatggtcatgaagaaatcaagcgccttgttgctttccaagaa
gaagtagtagaagcagttggaaaagctaaacgtgagataacgctgtttgaacttgatgca
gatatcgttgcagaagttgaaggcaaagcaaaagacgcactagtaaaagcaattcagaca
gaagaaaagcatgctcgtgatgaagcgatcacagaagttaagaacaacgtggttgctgaa
tacgaagaagctgaggctgagagcgaaaagattagtcaagtcaaatctgttcttgataaa
atcgtcaaagaagaagttcgtcgcttaatcacgaaagaaaagatccgtccagacgggcgt
aaaccggaagaaattcgttcattgtcttctcgtgtaggagtcttacctcgtacacacggt
tctggattgtttactcgtggacaaactcaagccttaagcatttgtacacttggtgcttta
ggtgatgttcaaattcttgatggtctcgatttagaagaatcgaaacgctttatgcaccac
tacaacttccctcactttagtgttggtgaaacaggcccaatgcgtggaccaggtcgtcgt
gaaatcggccacggtgcattaggtgagcgtgctcttgagaaagtggtaccatcagaagag
gacttcccttatacggtacgtcttgtgtcagaagtattagaatctaatggttcaacgtca
caagcaagtatttgtgcaagtacacttgcaatgatggatgctggtgttccgattaaagca
cctgtagctggtattgcgatgggtcttgtgaaatcaggcgaagattatacagttcttact
gatattcaaggtatggaagacttccttggagatatggactttaaagtggcaggtacagaa
aaaggtgtaactgctctacaaatggatattaagattgaaggtctatctcgctcaattcta
gaggatgcacttacacaagcgaaagctggacgtaaagaaatccttgatagcatgatcgcg
acaatcgaacagccacgtgaagagctttctgcatacgctccgaaaattcttacaatggcg
attaagcctgataagattcgtgacgttattggaccaagtggtaaacaaatcaacaagatt
atcgaagaaacaggtgttaaaatcgatatcgagcaagacggtaaaatcttcatctcatct
acagatgcagcagcgaaccgtaatgcaaaacagatcatcgaagacttggttcgagaagtt
gaagttggagaaacgtaccttggtactgttaaacgtatcgagaaatttggtgcttttgtt
gagctatttaaagggaaagacggcttagtgcacatttctcaactagctgaagaacgagta
ggtaaagtagaagacgttgtagcaattggagatcagttgaaggttaaggttaaagaaatc
gacaatcaaggtcgtgttaacctatctcacaaagacgtcatcattgaagaaaagaaacaa
caagaaactacagagtag
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