Pontibacillus sp. ALD_SL1: IMZ31_11205
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Entry
IMZ31_11205 CDS
T09942
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03030
DNA replication
pona03430
Mismatch repair
pona03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMZ31_11205
03430 Mismatch repair
IMZ31_11205
03440 Homologous recombination
IMZ31_11205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pona03032
]
IMZ31_11205
03400 DNA repair and recombination proteins [BR:
pona03400
]
IMZ31_11205
Enzymes [BR:
pona01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMZ31_11205
DNA replication proteins [BR:
pona03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMZ31_11205
DNA repair and recombination proteins [BR:
pona03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMZ31_11205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QSS98677
LinkDB
All DBs
Position
complement(2208759..2209697)
Genome browser
AA seq
312 aa
AA seq
DB search
MNFIALDFETANSSRASVCSIGLVEYENGQPKREYYSLVKPKRNYFAPINISVHGITQKD
VEEAYEFDTLWHQDIQPLLDGKFLLAHNAQFDMGVLRAVLDEYNIPYPMIAYNCTMNISK
KTWSFPRYNLKELSHHLNIDLNHHHALDDARAAAQIFLEAGKHLEASDEKEVVEKSQTIN
GMMFDASYEPARLNRKKRASKTGQNAQAKQYMAASRDFNTSHPFYNATFVFTGRLKSLKR
DEAIQRVVDLGGDWESSVQSTTNYVVVGNQAYENYLQGKKSSKLERVETLIAQGHSVEVL
SEDEFIRQLETA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatagcgcttgattttgaaacagccaattcttcgagagctagtgtttgttct
attggtctcgtagaatatgaaaatggtcagcccaaacgagaatattattcattagtaaag
ccgaagcgaaattattttgctccgattaatatatccgttcatggtattacgcaaaaagat
gtggaagaggcttatgagtttgacacgttgtggcatcaagacatccaacctcttcttgat
gggaagtttcttctcgctcataacgctcaatttgatatgggggtcttgcgagcggtgtta
gatgaatataacattccctatccaatgattgcttacaattgtacgatgaacatatcgaag
aagacgtggtcgtttcctaggtacaatttaaaagagctatctcatcatctaaatatagat
ttgaatcaccaccatgctcttgatgacgctcgggcagctgcgcagatcttcttagaagca
gggaaacatctcgaagcaagtgatgagaaagaagttgtggaaaaaagccaaaccattaac
ggaatgatgtttgacgcatcttatgaaccagcgcgtctaaatcggaagaaacgtgcgagc
aaaacgggtcaaaatgcacaagctaagcagtatatggcagcctcacgtgattttaatacg
tctcacccgttttataatgctacgtttgtcttcactggtagactgaaatcacttaaacga
gacgaagctattcagcgtgtcgttgatcttggtggtgactgggaatcttccgttcaatct
acaaccaactatgttgttgtaggaaatcaagcttacgagaattatctacaaggtaagaaa
agcagtaagttagagcgtgtagaaacactaattgctcaagggcactccgttgaagtcctt
tctgaggatgagtttatccgtcaacttgaaactgcttaa
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