Pontibacillus sp. ALD_SL1: IMZ31_13540
Help
Entry
IMZ31_13540 CDS
T09942
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pona
Pontibacillus sp. ALD_SL1
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pona03019
]
IMZ31_13540
03009 Ribosome biogenesis [BR:
pona03009
]
IMZ31_13540
Messenger RNA biogenesis [BR:
pona03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IMZ31_13540
Ribosome biogenesis [BR:
pona03009
]
Prokaryotic type
rRNA processing factors
IMZ31_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF1040
ATP-grasp_IQCH
Motif
Other DBs
NCBI-ProteinID:
QSS99098
LinkDB
All DBs
Position
complement(2651085..2652539)
Genome browser
AA seq
484 aa
AA seq
DB search
MKDIYIQTVPTEKWAVVMEESKIDLVSVSRQDDEDLVGNIYIGRVVNIEPSLQAAFVHFG
PSKLGFLKCSEIPDSRQNPEKRIEQLIHEGQALWVQVTKDAIEDKGAQLTANVTLPGQDI
VYLPFGQYHAVSKKIEEDRRNELMELASGWSEGKEGVLFRTSAKHVSDTRLLESCGRLKQ
EWKEIETALQNRKPPALAFEDPVIPDQIVRQYGENEVQSITVDEQWVKRHIDHRYPHLAS
KCEWKDSTHQKPFTIDQVIEKVIERNVPLQGGAEIVVDQTEAMVVIDVNSAKKVGKTSKS
QSVLQTNVAAAKEVAKQIRLRNLSGMILIDFITMKNPKDQQKVITALKKELKQDPVRSEV
LGFTKLGLLEMTRKRTSSSLSYRIAEKRPDHVLTLETKVYQLERELLSYRRSDKEVIVLE
VDPELLSLFREKIDIEKIKSFLYKEVYVLNNSKSDSSYRIRYVGDEKNLQERPFYIDGSL
DRLF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatttatattcaaacggtgccaacagaaaaatgggcagtcgtcatggaagaa
agtaagatcgacctggtatctgtttcaagacaagatgacgaagatctcgttggaaatata
tatataggaagagtcgttaatatcgagccaagcttacaagcggcctttgtacattttggc
cccagtaagcttggctttttgaaatgttcagagattcctgattcaagacagaatccagaa
aaacgaattgaacagctcatccacgaaggtcaggcgttatgggttcaggttacaaaggat
gccattgaagataaaggggcgcagttaacggcgaatgttacgttgccaggccaggacatc
gtttacctcccttttggccagtaccacgctgtgtcgaagaagattgaagaagacagacgt
aatgaattaatggaattagcctcaggttggagtgagggaaaagaaggggtcttgtttagg
acgtctgctaaacatgtatctgatactagattactggagtcctgcggtcgtttgaaacaa
gaatggaaagagatcgaaacagccctccaaaatcgcaaaccacctgccctggcttttgag
gaccctgttatacctgatcaaattgtaagacaatacggtgaaaatgaagttcaatcgatt
acagtcgatgaacaatgggtgaagcgccatatcgatcatcgttaccctcatcttgcatct
aagtgtgagtggaaagattccactcatcaaaaaccttttacaatagaccaagtgatcgag
aaggttatcgagcgcaacgtgccgctccaaggtggggcggagattgtggtggatcagact
gaagctatggtagtaatcgatgtaaattcagccaaaaaagtggggaaaacctcgaaatct
caatcagtgctgcaaaccaacgtcgccgcggccaaagaagtagctaaacaaatcaggctc
aggaatttatctggcatgattttaatcgactttataacgatgaaaaatccaaaagaccaa
caaaaagttataacggctttgaaaaaggagcttaaacaagatccagttcggtctgaagta
ctaggatttacgaagcttggactgcttgaaatgacgagaaagcgtacctcgtcctctctt
tcttataggatcgctgaaaaaaggccggatcatgtgttaacacttgagacaaaagtctac
cagctagagagggaacttctttcttatcgaagaagtgataaggaggttatcgtgcttgaa
gtcgatcccgagctcctttccttgttcagggagaaaatcgacatcgaaaaaataaaatct
ttcctttacaaagaggtctatgtccttaataatagtaaaagcgatagttcctatcgcatc
cgttatgtaggagatgagaaaaatctgcaagagcgacctttttatatcgacgggtctctt
gacaggttgttttag
DBGET
integrated database retrieval system
