Pontibacillus sp. ALD_SL1: IMZ31_18335
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Entry
IMZ31_18335 CDS
T09942
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pona
Pontibacillus sp. ALD_SL1
Pathway
pona03420
Nucleotide excision repair
pona03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pona00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMZ31_18335
03430 Mismatch repair
IMZ31_18335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pona03400
]
IMZ31_18335
Enzymes [BR:
pona01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMZ31_18335
DNA repair and recombination proteins [BR:
pona03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMZ31_18335
MMR (mismatch excision repair)
Other MMR factors
IMZ31_18335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
SLFN-g3_helicase
AAA_30
Rhodanese
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
QSS99988
LinkDB
All DBs
Position
complement(3703754..3706063)
Genome browser
AA seq
769 aa
AA seq
DB search
MSPNHEWEREQERVDEVVQEIEQKIEDINDRAGDVKEEVIGLRETFWEDVTVNIDEPDDI
METYNSLRQQAELLGERERSHKHVYDQMKTLRRMEHSPYFGRVDFTEDNEQETDQVYIGI
SSLMDRNDENFLVYDWRAPISSLYYDYSPGPAEYETPEGTIEGNMDVKRQYIIRQGQIKG
MFDTGITIGDELLQEVLGNRANTQMKSIVATIQKEQNQIIRYDRRPYLVVQGVAGSGKTS
AALQRVAYLLYQYRTKITADQMMLFSPNPMFNSYVANVLPELGEENIEQTTFQEYMAYRL
ESRLNFEDAYDQLEYLLTAEQNDAYQTRLEGVKYKATLQFKNDVDQYAESLSEDGLVFKN
IKFRGATIVSKENIHDYFYNLDSFISMPNRLEMVAEWLIKQVEAFEKKERSKEWVEEEIE
LLGKEELLKIHQKLQAGYRGNSETFDDAIQEKKILSKAIVKKYTKPIKRKINELKFLNMK
AIYTSFFHSETGLSEKAAKGTRENIESGNLFYEDVTPFLYLEDLIKGTHVYTHIRYLFID
EAQDYSPFQFAFLKKLFPYSRMTVLGDYNQAIYAHTLHAPTLLSEDLYEEERAEYMTLLR
SYRSTRQIIEFTKGMIPGGEAIEPFNRDGSLPSVIRTDNHEDQQNTLIKELYRLGEKKYD
TIAIICKTAEESREAYELLASCDIPVRLMDKDTYTFTKGILVIPVYLAKGIEFDAVVLYN
ASDKNYQLQLDRKLFYTACTRAMHELTLVTMDEPSRFIQEIPPDYYTYK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgtctccaaatcatgaatgggagcgggaacaagaacgagttgatgaagttgtgcaagaa
attgagcagaaaatagaagatataaatgatcgagcaggggatgtaaaggaagaagttatt
gggctacgggagaccttttgggaagacgtaacagtcaatattgatgagcccgatgacatc
atggaaacgtacaacagcctccggcaacaagccgaattgcttggtgagagagaacgtagc
cataaacacgtgtatgaccagatgaagactttaaggaggatggagcactctccttatttt
gggcgtgttgatttcacggaagacaacgagcaggaaaccgatcaagtttacataggaatc
tcttctttaatggatcgtaatgatgagaacttccttgtttatgattggagagctcctata
tcaagtctttactatgactattctccgggaccagctgaatatgaaacacctgaaggaacg
attgagggaaatatggatgtaaaacgccagtacatcattcgtcagggccagattaaaggg
atgtttgatacaggaataacgattggtgatgaacttcttcaagaagtgcttgggaaccgt
gccaatacacaaatgaaaagtattgtcgctaccatccagaaggagcaaaatcagattatc
cgatacgacagacgtccctatttagtcgtgcaaggagttgctggcagtgggaagacatcg
gcagcgcttcagcgagttgcttatttactttatcaatatcgaacaaagattacagcagat
cagatgatgttattctctcctaatcctatgtttaacagctacgtggctaatgtcctgcct
gaattaggagaggaaaacattgaacaaacaacctttcaggagtatatggcatatcggttg
gagtccagactgaattttgaagatgcttatgatcaacttgaatacttgcttactgctgaa
caaaatgatgcatatcagacacggctagaaggtgtgaaatataaggcgacacttcagttt
aaaaacgacgttgatcagtatgcagaatctctgtctgaagatggattggttttcaaaaat
ataaagtttaggggagcaacgattgtttcaaaagagaacatacatgattacttttataac
ttggactcctttatatcaatgccaaatcgacttgaaatggtggcagaatggctaattaaa
caggtggaagcctttgagaagaaggaacgctctaaagaatgggttgaggaagaaatagag
ctattaggaaaagaagaacttttaaaaatccatcagaagttacaagcaggatataggggg
aattcagaaaccttcgacgatgctattcaagagaagaaaatactttcaaaagcaatcgta
aaaaaatatacgaaaccaataaagagaaaaattaatgaattaaaattcctcaatatgaaa
gcaatctatacatcattctttcattctgaaacagggctttccgagaaggcagcaaaggga
acaagagagaatattgaaagtgggaacttgttttatgaagacgttacgccttttttatat
ttagaagatctaattaaagggacgcacgtctatacccatattcgttacttgttcattgat
gaagcacaggattactcgccattccagtttgcttttcttaaaaaactctttccttatagc
cgtatgacagtactgggggattacaatcaggctatatacgcccataccctacatgctcca
acgcttctttcggaagatctttatgaagaagagcgtgccgaatatatgacgctccttcga
agttaccggtctacgcgtcagattattgagtttaccaaagggatgattccgggtggtgaa
gccattgaaccatttaacagggatggctcacttccgtctgttatacgtacagacaaccat
gaagaccagcagaatactctaataaaagagttgtatcgacttggggagaagaagtatgac
accatcgcaattatttgtaaaacagctgaggaaagccgtgaagcttatgagttactagcg
tcatgtgacattcctgtccgtcttatggataaagatacgtacacgtttacgaaaggaatt
cttgttattccagtttatttagcgaaaggaattgaatttgatgcagtggttctctataat
gcgtcagataaaaactatcagcttcaacttgaccggaagttattctacacagcttgtacg
agagccatgcacgaactaacgttagtgacaatggatgaaccgagtcgatttattcaagag
attcctccagactattatacgtataagtaa
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