Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_01350
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Entry
ABXT40_01350 CDS
T11339
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABXT40_01350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pond02000
]
ABXT40_01350
Transporters [BR:
pond02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABXT40_01350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
XOJ56627
LinkDB
All DBs
Position
complement(266668..267930)
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AA seq
420 aa
AA seq
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MAKQIDRRSLLKTAGATAALAGFGLSAPAVHSANEKVVRYLGTATTMGSEIDKKLFEDTG
IKVKYIPVTTDEVTKRVLTQPNSFDIVDTEYFSLPKLVPSGNILGMDSKRIKEFDNISTT
HTMGEIGGKKIGDQGTAPKKVFYLKDEKSSEFSSEPTRWATLIPTVFNADTLGIRPDLIK
RPISTWAELLNPEFKGKASILNIPSIGIMDAAMVVESMGEYQYPDKGNMTRDEIDLTIKI
LIEAKKAGQFRALWSDFNESVNLMASGEVVIQSMWSPAITAVRTQGIPCVYQPLKEGYRA
WAVGFALSAATKGYQADVCYEFINWYLSGFVGGHLNRQGYYSAVPSTAKQYMEGYEWDYW
MLGKAAAKDIKAPDGKKLASAGEVRDGGSFVERMGGVACWNATMDENRYMVRKWNEFVAA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaatcgacagacggtcacttctgaaaacagctggcgccaccgccgccctt
gcaggatttggcctaagcgcgccagcagtgcattctgccaatgaaaaagttgtccgctac
cttggtacagcaacaacaatgggaagcgagattgacaagaagcttttcgaagacactggc
atcaaggtgaaatatattcctgtgacaactgatgaagtcacaaagcgggttttgacccag
ccaaacagctttgacattgttgatactgaatatttcagtctgccaaagctggtaccgtca
ggcaatatccttggaatggactcaaagcgcataaaggaattcgacaacatcagcacgacc
catacgatgggcgaaattggtggaaagaaaattggcgatcagggcacagctccaaaaaaa
gttttctatcttaaagacgaaaaatcgagtgagttctcatccgagccaacccgctgggca
acgctgatcccaactgtgttcaatgctgacacgcttggcatccgccctgaccttatcaaa
cgcccgatcagcacctgggccgaacttctgaacccggaattcaagggcaaagcatcaatt
ctgaacattccgtcaattggtattatggatgcggcgatggttgtcgaatcgatgggcgaa
tatcaatatccggataaaggcaacatgacgcgcgatgaaattgatctgacaatcaagatc
ctgattgaagcgaaaaaggccggccagttccgcgccctttggtctgatttcaacgaaagt
gtcaacctgatggcatcaggcgaagttgtgatccagtccatgtggtcacctgcgatcacc
gctgtgcgtacacaaggtattccatgcgtttatcagccgctgaaagaaggctatcgtgca
tgggcagttggctttgcattatctgctgcgaccaaaggctatcaggctgatgtttgctat
gaattcatcaactggtatttgtcaggatttgttggcggtcatctgaaccgtcagggctat
tactcagcagtcccatcaacagccaagcagtatatggaaggctatgagtgggattactgg
atgcttggtaaagcggcggcaaaagacatcaaagcccctgatggtaaaaagctggcaagt
gcaggcgaagtgagagacggcggttcattcgttgagcggatgggcggcgttgcctgctgg
aacgccaccatggacgagaacagatacatggttcgcaaatggaatgaattcgtagcggcc
taa
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