Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_03025
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Entry
ABXT40_03025 CDS
T11339
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond00470
D-Amino acid metabolism
pond00550
Peptidoglycan biosynthesis
pond01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABXT40_03025 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABXT40_03025 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pond01011
]
ABXT40_03025 (murD)
Enzymes [BR:
pond01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABXT40_03025 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pond01011
]
Precursor biosynthesis
Amino acid ligase
ABXT40_03025 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
LPD11
Motif
Other DBs
NCBI-ProteinID:
XOJ56944
LinkDB
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Position
complement(610873..612192)
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AA seq
439 aa
AA seq
DB search
MLVPHDMNGQTVGVLGLGGSGVAAVAALRAAGAHVVAFDDGKCQQDLPAIQMTDWREWPW
QDMAAMVISPGIPHLHPKPHPAAAHANSLQIDVISEVELALRAKPKAQLVVVTGTNGKST
TTALIGHCLATAGRAHAIGGNLGEPACSLDDPGKDGVLVLELSSYQLETTPSLAPDISIL
LNISPDHLDRHGGMNGYIAAKAVVLDQLGADCLAIIGDGDEHVKALAAATRKRGIKTMIA
SPDDAPDAQCHSASLAGLHNAENAAAAAFALAALGLDMAMINRGVKSYSSLPHRLQTVAR
CGKIQFVNDSKATNGVAAAKALSAFDDIYWVAGGLAKQDGLAPAMQYLGAVKKAYLIGTA
AAEFAKSIDGQCPAAICGDLEKATRAAFDDASAAIDGGTILLAPAAASFDQFTSFGARGD
AFAALAQNLCANTAGGNHA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctggttccacatgacatgaacggacagacagtcggggtcttaggccttggcggatcc
ggtgttgccgcagttgccgcattgcgggcagccggcgcgcatgtcgttgcctttgatgat
ggaaaatgccagcaagatcttccggcaattcaaatgaccgattggcgcgagtggccgtgg
caggatatggcggcaatggtgatcagcccgggcatcccgcatcttcatccaaagccgcat
cctgcagcagcccatgccaacagccttcaaattgacgtgatcagcgaagtcgaactcgcc
ttgcgggcaaaaccaaaagcccagcttgttgtggtcactggcaccaacggtaaatcaaca
acaacagcgctgatcggccattgccttgcaaccgccggacgcgcccatgcgattggcggt
aatctaggtgagccagcctgctcgcttgatgatccgggcaaagatggcgttcttgttctt
gaactatcctcttatcagctggaaaccaccccatcattggcacccgacatttcgatcctg
ctgaatatcagccccgatcaccttgaccggcatggcggcatgaatggttatatcgcggcc
aaggccgtggttcttgaccagcttggggcagattgcctagcgattatcggcgatggtgat
gagcatgtaaaagcgcttgccgccgcaacccgcaagcgcggaatcaaaaccatgattgcc
agccccgatgacgccccggatgcacagtgtcattcagcatcgcttgccggattgcataat
gccgaaaacgccgctgccgcagcctttgcgcttgccgcgcttgggcttgatatggcgatg
atcaatcgcggcgtcaaaagctattccagcctgccgcatcgtctgcaaaccgttgcccgc
tgtggtaaaatccagtttgtgaatgactcaaaagccaccaacggcgttgccgcggcaaag
gcattgtcggcctttgatgatatttattgggtggctggcggtcttgccaaacaggacggg
ctggcaccggcgatgcaatatcttggcgctgtcaaaaaagcctatctaattggcacggct
gccgccgaatttgccaaaagcattgatggacaatgcccagcagcgatttgtggtgatctg
gaaaaagccacacgcgccgcatttgatgatgccagcgcagcaattgatggtggcaccatt
cttttggcaccggcggcagcatcatttgatcaatttaccagctttggtgcgcgcggcgat
gcctttgccgcgcttgcccaaaatctttgcgccaacaccgcaggaggcaatcatgcttga
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