Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_04645
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Entry
ABXT40_04645 CDS
T11339
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond00260
Glycine, serine and threonine metabolism
pond00460
Cyanoamino acid metabolism
pond00630
Glyoxylate and dicarboxylate metabolism
pond00670
One carbon pool by folate
pond00680
Methane metabolism
pond01100
Metabolic pathways
pond01110
Biosynthesis of secondary metabolites
pond01120
Microbial metabolism in diverse environments
pond01200
Carbon metabolism
pond01230
Biosynthesis of amino acids
pond01240
Biosynthesis of cofactors
pond04981
Folate transport and metabolism
Module
pond_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABXT40_04645 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ABXT40_04645 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABXT40_04645 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABXT40_04645 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABXT40_04645 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABXT40_04645 (glyA)
Enzymes [BR:
pond01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABXT40_04645 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XOJ57540
LinkDB
All DBs
Position
914767..916041
Genome browser
AA seq
424 aa
AA seq
DB search
MKMDGFFSNTLAQSDPEVAAAIGDELVRQQDQIEMIASENIVSTAVMEAQGSVLTNKYAE
GYSGRRYYGGCEYVDVIETLAIERAKRLFNCNFVNVQPHSGAQANQAVFLSLLKPGDTIL
GMSLAAGGHLTHGAAPNLSGKWFNAIQYGVDEATAQVDFDELQRLALEHKPKMILAGGSA
YPRTLDFAAFRKIANSVGAYFMVDMAHISGLVAAGAHPSPIEHAHVVTSTTHKTLRASRG
GLILTNDEALAKKFNSAVFPGLQGGPLMHAIAGKAVAFGEALRPEFKAYTNMVVSNARIL
AETLISRGVSIVSGGTDTHVVLVDLRPKGLTGNVTELSLEHAGITCNKNGIPFDPQPPTV
TSGVRLGTPAGTTRGFGNDEFVKIGHLIGDVLDGLAQNAEDNKAVEARVREEVRALCRAF
PIYQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacggttttttcagcaatacactggcacaaagtgatcctgaagtggctgct
gcgattggtgatgaattggtgcgtcagcaagatcagatcgaaatgattgcctcagaaaac
attgtcagcaccgcggtaatggaagcccaagggtcggtcctaaccaataaatatgccgaa
ggctattcaggtcgtcgctattacggcggttgcgaatatgttgatgtgatcgaaacattg
gcgatcgagcgcgcgaaaagattgttcaattgtaatttcgtcaacgtgcagccgcattcg
ggcgcgcaggcaaaccaggctgttttcctaagcctgttaaagccaggcgataccattctt
ggcatgtcattggcagccggcggccatctaacgcatggtgccgcaccaaacctgtctggt
aaatggttcaacgcaatccaatatggcgtggatgaagccaccgcacaggtggattttgac
gaattacagcggctcgccctcgagcataagccgaaaatgatccttgctggtggatccgcc
tatccacggacattggattttgccgcattccgtaagattgcaaactcggttggtgcctat
ttcatggttgatatggcgcatatttcgggtctggttgctgctggtgcgcatccaagcccg
attgagcatgcgcatgttgtcacctcgaccacgcataaaaccttgcgggcgtcacgcggc
ggcttgatcctaaccaatgatgaggcgcttgccaaaaaattcaattcagccgtttttccc
ggcttgcaaggcggcccattgatgcatgccatcgctggtaaagcggttgcctttggcgag
gcgcttcgccctgaattcaaggcctatacaaatatggttgtcagcaatgcgcgcattctt
gccgaaacattgatttcgcgcggtgtgtctatcgtttcaggcggcacagatacccatgtt
gttcttgttgatcttcggccaaagggtttgaccggtaacgtgaccgagctatcgcttgaa
catgcggggatcacctgtaacaaaaacggtattccgtttgatccgcagccgccgacagtg
acatcgggtgttcgtcttggcacacctgctggaacaacacgcggttttggtaatgacgaa
tttgtcaaaattggccatctgattggtgatgttcttgatggtttggcgcaaaatgccgag
gataacaaggcggttgaggcgcgtgtgcgcgaagaagtgcgcgcattatgtcgggctttc
ccaatctatcaatag
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