KEGG   Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_05090
Entry
ABXT40_05090      CDS       T11339                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pond  Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pond00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABXT40_05090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pond02022]
    ABXT40_05090
Two-component system [BR:pond02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   ABXT40_05090
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 VpsR AAA_5 AAA_2 AAA_16 FleQ AAA AAA_14 RNA12 Y4lR_N
Other DBs
NCBI-ProteinID: XOJ57324
LinkDB
Position
999507..1000907
AA seq 466 aa
MADDILIVDDEKDIRSLLSMTLEDEGYATLQAANADEARSALLAQPPKLAILDIWMRDSD
MDGIELLEWVKSIYPSLPVLMISGHGTIETAVQAIRLGAYDFIEKPFKEARLLMMVERAL
DNARLARENIELRARIDDGETPELIGNSAVMRTIRQSIEKIAPTASRVLINGPSGSGKEL
AARTIHSQSDRRQEQFVVANCARLSTERVDAELFGAESLQSHRRIVGLFEQAHRGTLYFD
EICDLPLETQGKIVRAVNQQRFRRVGGNSEVVVDVRVISASSRDLLSETSAGRLREDLYY
RLGVVPLSMPSLADRREDIPVLAKYFTNRIAKHVGVKPIHLSDEIFAAMQGYDWPGNVRQ
MRNVIETLLIMAPDDRNQPVGLDLLPAEIQNMSRQGTNSDMEQLMALPLRGAREEFEREY
LETQLHKFNGNISRMAAFIGMERSALHRKMKSLDIATDLQEEGKKT
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctgatgatattctgattgttgatgatgaaaaagacattcgctcgttgttaagcatg
acgcttgaagatgaaggatatgccaccctgcaagcggctaatgctgatgaggcaagatca
gcattgctggcgcagccgccgaagctggctattcttgatatatggatgcgcgattccgat
atggacggcatcgaattgcttgaatgggtgaaatccatctatccgtcattgccagtactg
atgatttcagggcatggaacaattgaaaccgcggttcaggccattcggcttggggcttat
gactttatcgaaaaaccgttcaaagaagctcgcctgttgatgatggttgagcgggcgctt
gataatgcgcggcttgcacgcgaaaatatcgaattgcgggcgcgaattgatgatggggaa
acccctgaattaattggtaattcggcggtgatgcggacaatccgtcaatcaatcgaaaaa
atcgcgccaaccgccagccgtgttttgatcaatgggccaagcggaagcggcaaagaattg
gctgcgcgcacgattcacagccagtcagatcgccgtcaagaacaatttgttgtcgccaat
tgtgccagattatcaaccgaacgcgttgatgctgaactatttggtgcggaaagcctgcaa
agccatcgccgtattgttggcttgtttgaacaggcgcatcgcggaacattgtattttgat
gaaatttgcgatttgccactggaaacgcaaggcaagattgtgcgcgccgtcaatcaacag
cggtttcggcgtgttggtggcaatagcgaggttgtggttgatgtgcgggttatttcggcg
tcaagccgtgatctgttgtcggagactagcgctggccgtcttcgcgaagatttatattac
cggcttggcgtggtgccattatcaatgccgtcacttgccgatcggcgtgaagatattccg
gttctggcaaaatatttcaccaatcgcattgccaaacatgttggggtaaagcccattcat
cttagtgatgagatttttgctgcgatgcagggctatgattggccgggcaatgtgcggcaa
atgcgtaatgtaattgaaaccttgctgatcatggcacctgatgaccgcaaccagcctgtg
gggcttgatttgcttccggctgaaattcagaatatgtcgcgtcaaggtaccaattctgat
atggaacaattgatggccttgccattgcgcggcgcgcgtgaagaatttgaacgcgaatat
ttggaaacacaattgcataaattcaatggaaatatctcgcgtatggcggcgtttatcgga
atggaacgatctgccttgcatcgcaaaatgaaatcgcttgatatcgcaacggatcttcaa
gaagagggtaaaaagacatga

DBGET integrated database retrieval system