Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_07305
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Entry
ABXT40_07305 CDS
T11339
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABXT40_07305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pond02000
]
ABXT40_07305
Transporters [BR:
pond02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABXT40_07305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Lips
TNF
Motif
Other DBs
NCBI-ProteinID:
XOJ55541
LinkDB
All DBs
Position
complement(1440341..1441255)
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AA seq
304 aa
AA seq
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MAKLPPYTSTGEYIWHYVYRSICGLIFLFLIMPIIVVLPLSFNVEPYFSFTKGMLNFDPA
AYSLRWYEDILRNGMKAPDAPFDWAWLADTWNNGQWIRAIRNSFFIGICATLLSTALGTL
AAIGLSRSEMPYRRLVMSILISPMIVPLIITAAGMFYFYSQVHLSQTYLGVIMAHAVLGT
PFVIITVTATLVGFDKSLVRASQSLGAGAVTTFRKVQMPLIIPGVISGGLFAFITSFDEV
VAVLFLASPEQRTIPRQMWSGIREQISPTILAVATLLVILSIILLTVLELLRRRSERLRG
ITSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcttcctccctataccagcactggtgaatatatctggcattatgtttatcgc
agcatttgcggattgatcttcctgtttttgatcatgccaatcattgtggttttgccgctg
tcattcaatgtcgagccttatttcagctttaccaagggcatgttgaattttgaccccgca
gcctattcgcttcgctggtacgaggatattctgcgcaatggtatgaaggcgccggatgcg
ccatttgattgggcatggcttgccgatacatggaataatggccaatggatcagagccatt
cgcaacagttttttcatcggaatttgtgcaacgcttttgtcaactgcgcttggtacattg
gcggcaattggtcttagccggtctgaaatgccctatcgccggttggttatgtcgatcctg
atttcgccgatgattgtgccattgattattaccgcagctggcatgttctatttctattcg
caggtgcatttgagccaaacctatcttggcgtgatcatggcgcatgcggttcttggcacg
ccctttgtgatcattaccgtaacagcaacccttgttggttttgacaaatcgctcgttcgg
gcatcgcaatcgcttggcgcgggggcggttaccacctttcgcaaagtgcagatgccattg
attatccccggggttatttcaggcggcctttttgcctttatcacctcatttgacgaagtg
gtggcggttctgttcctggccagtccggaacagcgaacgattccgcgtcagatgtggtcg
ggtattcgcgagcagatcagcccaacgattcttgccgttgccacgctgttggtgatctta
tcgatcattcttttgacggttttggagttattgcggcggcgttctgaacggctgcgcggg
atcacaagcagctag
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