Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_09400
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Entry
ABXT40_09400 CDS
T11339
Name
(GenBank) FAD-binding domain-containing protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pond03400
]
ABXT40_09400
Enzymes [BR:
pond01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABXT40_09400
DNA repair and recombination proteins [BR:
pond03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABXT40_09400
Prokaryotic type
ABXT40_09400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HSBP1
Motif
Other DBs
NCBI-ProteinID:
XOJ55927
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Position
complement(1888749..1890326)
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AA seq
525 aa
AA seq
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MQPKVIIVWFKRDLRVFDHAPLANAVHDADFVLPLFVVEPDYWRLPTSSRRHWCFVNDCL
HELDASLAALGQRLILRIGEMTDVLDELSRHVQIQAIYAHEETGDAWTYARDRKVHAYCQ
RADIPFRESPANGVVRRLKNRNDWAATRHQRMQASRIPRPASLPALPLLQSEPIPQKDNP
LFGAALDQLSASGKTAIQPHVQTGGRKAAIALLTSFLQDRSQFYIKNLASPSQGPDTSMR
LSPHLAWGTMSSREVEASIRNYLANPENDITPAKRRGCRAVMSRLAWRCHFMQKLEDQPD
IEWAAMHPLYESVRDDTDQDAGRKAAYLAAWKMGQTGYPMIDACMRSLIHQGWITFRMRA
MLVSFASYHLWLDWRLTAPYLAQLFTDYEAGIHYSQFQMQSGVTGINTIRIYNPVKQSID
HDPDGQFIRRWVPELADLPSQWIHQPQAMPPVEAAAIGWVIGRDYPLPIVENAAAMREAR
DRIYAVRKSDQFKAMARAVYQKLGSRKPAPKRPHRKISDAQPRLI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaaagtgatcattgtctggttcaaacgtgaccttcgtgtgtttgaccatgcg
ccacttgccaatgcggtgcatgacgccgatttcgttttgccgctttttgttgtcgagccg
gattattggcgattgccaacatcatcaaggcggcattggtgttttgtgaatgactgtctt
cacgagctggatgccagcctcgcagcgcttgggcagcggttgattttacgcattggcgag
atgactgacgtgctggatgagctgtcgcgccatgtgcaaattcaggcgatctatgcgcat
gaagaaaccggtgatgcgtggacctatgcgcgtgatcgaaaagtgcatgcctattgccag
cgggcagacataccattccgggaatcaccggcaaatggcgttgttcgacggttgaaaaac
cggaatgattgggcggcgacgcgccatcagcgcatgcaggcaagccggattccacgacct
gccagcctgccagccttgcccttgctgcaaagcgaaccgatcccgcaaaaagataacccg
ctttttggggcggctcttgaccaattatccgcaagtggaaaaaccgctatccagccgcat
gtacaaaccggcgggcgtaaagcggccattgccttgcttacttcatttctgcaggaccga
agtcaattctatatcaagaatcttgcctcgccatcacaagggccagatacatcgatgcga
ttatcgccgcatctggcatggggaacaatgtcatcgcgtgaggttgaggccagcatccgc
aattacctagctaatccggaaaatgatatcacgccggccaaacgccgtggttgccgtgcg
gtgatgtcgcggttggcttggcgctgccatttcatgcaaaagcttgaagatcagccagat
attgaatgggccgcgatgcacccgctttatgaatcggttcgtgatgatacggatcaagat
gccggtcgcaaagcggcctatctggccgcatggaaaatgggacaaaccggctatccgatg
attgatgcctgcatgcgttcgctaattcatcaaggctggatcacttttcggatgcgggcg
atgctggtcagttttgccagctatcatctatggctcgattggcggttaaccgcgccctat
ttggcgcaattatttactgattatgaagctggcattcattacagccagtttcagatgcag
tcgggagtgaccggcatcaacacaatccggatctataatccggtcaaacaatcaattgat
catgatcctgatgggcaatttatccgccgatgggtgcctgaactggcggatttgccttca
caatggattcaccaaccgcaggccatgccaccggttgaggccgcggcgattggctgggtc
attggacgtgattatccgttgcccattgtcgagaatgcggcggccatgcgcgaggcgcgt
gaccgcatttatgccgtccggaaaagcgatcaattcaaggcgatggcgcgtgcggtctat
caaaaattaggaagccgcaaaccggcgccaaaaaggccacaccgtaaaataagtgatgcg
caaccccgcctgatttaa
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