Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_11100
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Entry
ABXT40_11100 CDS
T11339
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond00300
Lysine biosynthesis
pond00470
D-Amino acid metabolism
pond01100
Metabolic pathways
pond01110
Biosynthesis of secondary metabolites
pond01120
Microbial metabolism in diverse environments
pond01230
Biosynthesis of amino acids
Module
pond_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABXT40_11100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABXT40_11100 (dapF)
Enzymes [BR:
pond01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABXT40_11100 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XOJ56244
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All DBs
Position
complement(2250136..2251005)
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AA seq
289 aa
AA seq
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MTAFLKMQGLGNDFIVLDARDPANGIPDVIGAAVATRLADRHFGIGCDQILIIRASAKAD
IFMQILNSDGSDAAACGNGTRCVADLVMRDLGLSKLSIETDAGILQSWRAAEVADHIAVD
MGPARLAWDEVPLASPADTAAVDLGALAPVTAVCHSMGNPHAVLFVDDAEAIDLAHIGPQ
LEHHPLFPDRANISFVTKVGPDQFRMRVWERGGGITFACGSGACAVGVAVKRSGRGARRN
EIIMDGGSVFIDWQDDGTAGGRVIMRGPVAYVFDGVLHGDLLALMRTSA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttttgaagatgcagggccttggcaatgatttcattgttcttgatgcgcgc
gatccggcaaatggcattcccgatgtgatcggggctgctgtggcaacgcgtcttgctgac
cgccatttcggcattggctgtgatcagatattgattatccgcgcttcggctaaggctgat
attttcatgcagattctcaatagcgatggcagtgacgctgctgcttgcggcaatggcaca
agatgcgttgccgatctggtgatgcgcgatcttggattatcaaagctgtcgatcgagaca
gatgctggcattttgcaaagctggcgtgcggctgaagttgccgatcatatcgcggttgat
atggggccggcgcggcttgcatgggatgaggtgcctttggcaagtcctgccgatacggcg
gcggttgaccttggcgcattagcaccggtgacagcggtttgccattcaatgggcaatccg
catgcggtgctatttgtcgatgatgcagaggcgattgatcttgcgcatatcgggccacaa
cttgagcatcatccactatttcccgatcgggcgaatatttcctttgtgaccaaggttggt
ccagaccagtttcgcatgcgcgtatgggaacgtggcggtggcattacctttgcctgtggg
tcaggagcttgtgctgttggtgttgcggtaaagcgatcggggcgcggtgcgcggcgcaat
gaaatcatcatggatggcggcagtgtttttatcgactggcaggatgatggcacagcaggc
gggcgggtgattatgcgcgggccggttgcctatgtttttgatggggtacttcacggcgat
ttattggcattgatgaggacaagcgcatga
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