Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_11705
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Entry
ABXT40_11705 CDS
T11339
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXT40_11705 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pond03019
]
ABXT40_11705 (pnp)
03016 Transfer RNA biogenesis [BR:
pond03016
]
ABXT40_11705 (pnp)
Enzymes [BR:
pond01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABXT40_11705 (pnp)
Messenger RNA biogenesis [BR:
pond03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABXT40_11705 (pnp)
Transfer RNA biogenesis [BR:
pond03016
]
Prokaryotic type
tRNA degradation factors
ABXT40_11705 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XOJ56359
LinkDB
All DBs
Position
2382647..2384767
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AA seq
706 aa
AA seq
DB search
MFKLFRKELEWGGTKLVLETGKVARQADGAVMVSLGETKVLCTAVAAQSPKPGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSENETLVCRLIDRPIRPLFPKSFKCETQVICTVLAH
DMENNPDIAAMIGASAALTLSGVPFFGPIAAARIGWIDGAYVLNPTVDQMDESELDLIMA
GTHEGVLMVESEAKELSEEIMLGAVNFGHQSVKPVIDAIIELAESCAKEPRALPEEPAEI
ADINRALKGFAKGFEAAYKIADKTDRQAALNEVRAEAKVAIGDDYDAVLVGGLIKGMEAD
VVRGAILKTGVRIDGRDTKTVRQIVAEAGFLPRAHGSSLFTRGETQAMVVATLGTGQDEQ
IIDALVGESRSSFMLHYNFPPYSVGEAGRVGSPGRREIGHGKLAWRALRPLLPSKDEFPY
TIRLVSEITESNGSSSMATVCGGSLAMMDAGVPLKRPVAGIAMGLIKEGDDFAVLSDILG
DEDHLGDMDFKVAGSQNGVTSLQMDIKITSITPEIMQIALDQARDGRIHILDEMAKALTS
ARDDLADSAPKITTLKIPVDKIRDIIGPGGKIIREICEETGAKIDIEDDGTVKVAAVSGS
SGEAAVARIRDIVAEPELGVIYNGTVVKTVDFGAFVNFLGAKDGLVHISELQNGRTEKTT
DICKDGDAVKVKVIGFDDRGKVKLSMKRVDQETGADLEAAAAETAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagttattccgcaaagaattggaatggggcggtacaaagctggttcttgaaacc
ggtaaagttgcccgtcaagccgatggcgccgttatggtcagccttggtgagacaaaagta
ctatgtacagctgttgcggcgcaaagcccaaagcctggtcaggattttttcccattgacc
gtcaattatcaggaaaaagcctttgcagcgggtaaaatccccggcggctttttcaagcgt
gaaggccgtccttcggaaaatgaaacccttgtttgccgtctgattgatcgcccgatccgt
ccgttattcccgaaatcattcaaatgtgaaactcaggttatctgtaccgttctggcgcat
gatatggaaaataatcctgatatcgccgcgatgattggtgcttcggcagctttgacctta
tccggtgtgccgttctttggcccgattgccgctgcgcgcattggctggattgatggagcc
tatgttttgaacccaaccgtcgatcagatggatgaaagcgaacttgatctgatcatggcg
ggaacgcatgaaggcgttttgatggttgaatcagaagccaaggaactgtcagaagaaatc
atgcttggcgcggtgaattttggtcaccagtccgtcaagccggtgattgatgccattatc
gaactagccgaatcatgtgctaaagagccccgcgcgcttcccgaagagccagcagaaatt
gctgatatcaacagggctctaaagggttttgccaagggttttgaagccgcttataaaatt
gccgataaaaccgatcgtcaggcagctttgaatgaggttcgcgccgaagcaaaagtcgca
attggcgatgattatgatgccgttcttgttggtggcctaatcaaaggcatggaagccgat
gttgttcgtggtgcgatcttgaaaaccggcgttcggattgatggtcgtgacacaaagacc
gttcgccagattgttgccgaggctggattcctgccgcgggcgcatggatcatctttgttc
acccgcggtgaaacacaggcgatggttgttgccacgcttggcacgggtcaggacgagcaa
attattgatgcgttggttggtgaaagtcggtctagcttcatgcttcattataattttcca
ccatattcagttggcgaggctggccgtgttggttcgcctggtcgtcgtgaaattggtcat
ggaaaattggcatggcgtgcgcttcgtccgttgctgccaagcaaagatgaatttccctac
acgatccggcttgtttctgaaatcaccgaatcaaacggatcatcttcaatggcgaccgtt
tgtggtggttcattggcgatgatggatgctggcgtgccattgaaacgtccggttgctggt
attgcgatgggattgatcaaagaaggcgatgattttgccgttctatccgatattcttggt
gatgaagatcatcttggcgatatggattttaaagttgccggttcacaaaatggtgtgacc
tcattgcagatggatatcaaaatcacatcaatcacacctgagattatgcaaattgcactt
gatcaggcacgcgatggccgaattcatattctcgatgaaatggccaaggcattgacctcg
gcgcgtgatgatttggccgatagcgcgccaaagatcaccaccttgaaaattccggttgac
aaaatccgcgacatcattggcccgggcggcaaaatcatccgtgaaatctgtgaagaaaca
ggtgccaagattgatatcgaagatgatggcaccgtcaaggttgcagccgtttcaggctca
tcaggtgaagccgctgttgcgcggattcgtgatattgttgccgagccagagcttggcgtg
atctataacggcactgtagtcaaaacggttgatttcggggcgttcgtcaatttccttggg
gcaaaagacgggctggttcatatttccgagctgcaaaatggccgtaccgaaaaaaccacc
gacatctgtaaagatggtgatgcggttaaggtcaaggtcatcggctttgatgatcgtggt
aaggtaaagctgtcaatgaagcgcgttgatcaggaaaccggtgccgatcttgaggctgct
gctgctgaaactgctgaatag
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