Pontimicrobium maritimum: ABGB03_10825
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Entry
ABGB03_10825 CDS
T11291
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pons Pontimicrobium maritimum
Brite
KEGG Orthology (KO) [BR:
pons00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pons03032
]
ABGB03_10825 (gyrB)
03400 DNA repair and recombination proteins [BR:
pons03400
]
ABGB03_10825 (gyrB)
Enzymes [BR:
pons01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABGB03_10825 (gyrB)
DNA replication proteins [BR:
pons03032
]
Prokaryotic type
DNA Topoisomerases
ABGB03_10825 (gyrB)
DNA repair and recombination proteins [BR:
pons03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABGB03_10825 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Allatotropin-like_C
Motif
Other DBs
NCBI-ProteinID:
XBG60348
UniProt:
A0AAU7BQE7
LinkDB
All DBs
Position
complement(2314973..2316922)
Genome browser
AA seq
649 aa
AA seq
DB search
MSQEKEEFNKHNYSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALA
GHCNNITVIINEDNSITTEDDGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSG
GLHGVGVSCVNALSEHLKATVFREGKVYEQEYERGKAMYPVKQVGETDKRGTTVTFRPDS
TIFTQTLEYSYDTLASRLRELAYLNKGITIHLVDKRHKKDDGEFEGETFHSEEGLKEFIK
FLDGNREPLMKDVIAFEGEKNGVPVEVAMIYNTSYAENLHSYVNNINTHEGGTHLSGFRR
GLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSA
SVSQAVSEMLTDYLEEHPDDAKIIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKL
SDCSEQDPAKCEVFLVEGDSAGGTAKAGRDRNFQAILPLRGKILNVEKAMSHKVFENEEI
KNIFTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADIDGSHIATLILTFFFRYMKELIE
NGHIYIATPPLYLVKRGAKSKYAWSDKERDEIVAEFGDGSKIQRYKGLGEMNAIQLWDTT
MNPEFRTMRLVQIDNGIEADRIFSMLMGDDVPPRREFIEKNAIYANIDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaaaggaagagtttaataagcataattattctgctgatagtattcaagca
ttagaaggaatggagcatgtacgtatgcgtccatctatgtatattggagatgttggtaca
agaggtttacatcatttagtttatgaagttgtagataactccattgatgaagctttagct
ggtcactgtaataatattactgtgattatcaatgaagacaattctatcacaaccgaagat
gatggtcgtggtattcctgtagatcttcataaaaaagaaggtgtttctgcacttgaggtt
gtaatgacaaaaattggagcaggaggaaagtttgataaagattcttataaggtttctggt
ggattgcatggtgttggtgtaagttgtgtaaacgctttgtctgaacacttaaaggcaact
gtttttagagaaggtaaagtttacgaacaagaatatgaacgtggaaaagccatgtatcct
gttaagcaagttggagagacagataaaagaggaacaacagtaacctttagacctgactct
acaatctttacgcaaactttagagtatagttatgatacccttgctagtcgtttacgtgaa
ttagcatatttaaataaaggaattacaatccatttagttgataaaagacataagaaagat
gatggtgaatttgaaggtgaaacattccattctgaagaaggtcttaaagaatttatcaaa
ttcctagacggaaacagagaacctttaatgaaagacgttatcgcttttgaaggtgagaaa
aatggtgttcctgtggaagttgcgatgatttataatacatcatacgctgagaatttacat
tcgtatgtaaacaacattaacacacatgaaggaggtacacatctttctggtttccgtcgt
ggcttaacacatacacttaaaaagtatgccgacgaatctggtatgctagataaattaaag
tttgatatagctggtgacgattttcgtgaaggtttaactgcaattatatctgtaaaagtt
caggaacctcaatttgaaggtcaaacaaaaaccaagttaggaaacagagaagtttctgca
tcggttagtcaagcagtttctgaaatgttaaccgattacttagaagaacatccagatgat
gctaagattatagttcaaaaagttatactagctgctcaagcacgtcatgctgctcagaaa
gcgcgtgaaatggtacaacgtaaaaccgtgatgagtattggtggtttgcctggaaaatta
agtgattgttcagagcaagacccagcaaaatgtgaagtatttttggtagagggagattcg
gcaggtggaacagcaaaagctggacgagatagaaattttcaagctattttaccattgaga
ggtaaaatattgaatgtagaaaaggcaatgtctcataaagtgtttgaaaatgaagaaatc
aaaaatatttttaccgctcttggtgtaactattggaacggaagaagacagtaaagcttta
aatctttcaaaattacgttatcataaagtagtaattatgtgtgatgccgatattgatggt
agtcatattgctacattgattttgactttcttctttagatatatgaaagaattgattgag
aatggtcatatctatatcgcaactccaccgctttacttagttaaaagaggtgcaaaaagc
aaatatgcttggagtgataaagaacgtgatgagattgttgcggaatttggagatggttct
aaaattcaacgatataaaggtcttggagaaatgaatgctatccaactttgggatactact
atgaacccagaatttagaaccatgcgtttagtacaaatagataatggtatagaagccgat
cgcattttctcaatgttaatgggagacgatgtgccaccacgtagagaatttatcgagaaa
aatgctatttatgcaaatatagatgcgtaa
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