Pontibacter sp. SGAir0037: C1N53_00465
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Entry
C1N53_00465 CDS
T09933
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pont
Pontibacter sp. SGAir0037
Pathway
pont00521
Streptomycin biosynthesis
pont00523
Polyketide sugar unit biosynthesis
pont00525
Acarbose and validamycin biosynthesis
pont00541
Biosynthesis of various nucleotide sugars
pont01100
Metabolic pathways
pont01110
Biosynthesis of secondary metabolites
pont01250
Biosynthesis of nucleotide sugars
Module
pont_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C1N53_00465 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C1N53_00465 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C1N53_00465 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C1N53_00465 (rfbB)
00525 Acarbose and validamycin biosynthesis
C1N53_00465 (rfbB)
Enzymes [BR:
pont01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C1N53_00465 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QCR20986
UniProt:
A0A4P8RBN2
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All DBs
Position
105956..107005
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AA seq
349 aa
AA seq
DB search
MTKILITGGAGFIGSHVVRRFVNSYPKYEIVNLDKLTYAGNLANLADIEHLPNYKFIKGD
IVDAIFLENLFAEGQFDAVIHLAAESHVDRSITNPLDFVMTNVVGTVNLLNAARKHWQDD
FVNKRFYHVSTDEVYGSLGEDGMFTETTPYDPRSPYSASKASSDHFVRAYHETYGLNTVI
SNCSNNYGSFHFPEKLIPLAINNIKSNKPIPVYGKGENVRDWLWVEDHARAIDVIFHKAA
PGTTYNIGGHNEWKNIDLIQLLCKIMDEKLDRVPGTSAKLITYVTDRAGHDLRYAIDSTK
LQRELGWSPSLQFEEGLEKTVTWYLHNEEWLEGITSRDYQAYYNTQYNR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaattttaattactggcggtgcaggttttataggatcacatgtagttcgcagg
tttgtaaacagctatccaaaatatgaaattgttaatttagacaagctaacgtatgctggt
aatctcgctaatttggcagacatagagcatttaccaaattacaagtttattaaaggagat
atagttgatgctattttcttagaaaatttgtttgcagaaggacaatttgatgctgttatt
catttagcagctgaaagccatgtagatcgttctatcacaaacccactggattttgttatg
acaaatgtagtgggaactgtaaatttattaaacgcagcccgcaaacattggcaagatgac
tttgtgaataaacgcttctaccacgtatctaccgatgaagtatatggatcattaggagaa
gatggtatgtttacagagactaccccttatgatcctcgtagcccctattcagcttcaaaa
gcaagttcagatcattttgttagagcctatcatgaaacctacggtttgaacacagttata
tctaattgttcgaacaactacggttctttccattttccggaaaaacttattccgcttgca
atcaataatataaaaagcaacaagcctatccccgtttatggcaaaggagaaaatgttcgt
gattggctttgggtagaagatcatgcccgagctattgatgtcatttttcataaagcagca
ccaggtacaacttataatattggcggccataacgagtggaaaaacatcgatttaattcag
ctgttatgcaagataatggatgaaaagttagatcgagtacctggaacctctgccaaactt
attacttatgtaaccgatagagctggccatgatttgcggtatgccatcgactcaaccaaa
ttgcagcgggagttaggttggtcgccaagtttacaatttgaagagggcttggagaaaact
gtaacatggtacctacataatgaagagtggcttgaaggcattacttcaagagattaccag
gcatactataacacacaatataatagataa
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