Pontibacter sp. SGAir0037: C1N53_04570
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Entry
C1N53_04570 CDS
T09933
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pont
Pontibacter sp. SGAir0037
Pathway
pont03030
DNA replication
pont03430
Mismatch repair
pont03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N53_04570
03430 Mismatch repair
C1N53_04570
03440 Homologous recombination
C1N53_04570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pont03032
]
C1N53_04570
03400 DNA repair and recombination proteins [BR:
pont03400
]
C1N53_04570
Enzymes [BR:
pont01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N53_04570
DNA replication proteins [BR:
pont03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N53_04570
DNA repair and recombination proteins [BR:
pont03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N53_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
TagH_C
DUF7508
Ig_NUP210_4th
Motif
Other DBs
NCBI-ProteinID:
QCR21689
UniProt:
A0A4P8RGN0
LinkDB
All DBs
Position
complement(1092783..1094192)
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AA seq
469 aa
AA seq
DB search
MYAIIDIETTGSQPAQDKITEIAIFIHDGHQIVDKYATLINPQRPIPYFITQLTGISDEM
VQDAPKFYEVAKEIVEFTEGKVFVAHNVRFDYSFLKKEFADLGFTFQRKTLCTVRLSRSL
IPGLPSYSLGKLCKSIDIDLQQRHRAIGDAEATAKLFDKLIKINRPVIDGAQHMAEPSEQ
LKQEIKTSLLPPAISKEQIDALPLVPGVYYFHNDKGEVIYVGKSINIRKRIIQHFNIDYK
SRKSIEFKNQIADITYELMGNELVALLFESAEIKRMKPHYNRQQRRSVFNTGIFMYEDSN
GYKRLTYGSINKADNVSMTPIIALSNQFKAKGFLFHKVSKYNLCQKLCNLYKTNGACFDY
QVHQCNGACIGQESPEVYNARVDAAIESFTFEHNSFVIIGKGREPGEKSVVVIENGTYLG
FGFVDEYFSAAALEDFKGAITRYNDNKDIQQIIRGHMRGKNKDKVIVFD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgatattgaaaccacaggcagccagcctgcgcaggacaagataaca
gagatagccattttcattcatgatggccatcagatagttgataaatacgctacactgatc
aacccgcagcggccgatcccatactttattacccagcttaccggcatttcagatgaaatg
gtgcaggacgcgcctaagttttacgaagtggccaaagagatagtggaattcacagagggt
aaagtatttgtagcgcataatgttcgcttcgactactctttcctgaaaaaagaatttgcc
gacctgggctttacatttcagcgaaagacgctttgcaccgttcgcttaagccgttccctc
attcccggacttccatcctatagcctgggcaaactttgcaaaagcattgacattgatctg
cagcagcggcaccgggctattggcgacgctgaggccactgcaaagctctttgataaactt
atcaagattaacaggcctgttattgatggtgcgcagcatatggcagagccttcggaacag
ctgaagcaggaaatcaaaacttctcttctgccgcctgctatttctaaagaacaaattgat
gctttgccgcttgtgcccggtgtttattatttccacaacgataaaggcgaggtaatttat
gtgggaaagagcatcaacattcgaaaaagaattattcagcacttcaacatcgactacaag
agccggaagtctattgagtttaaaaatcagattgctgatataacctatgaactgatgggc
aacgaactggtagctttattgttcgagtcggctgaaataaagcgcatgaagccgcattat
aaccgccagcagcggcgcagcgtgtttaacaccggcatttttatgtacgaagacagcaac
gggtataagcgcctgacctatggcagcattaacaaggctgataatgtgagcatgacgcct
atcattgctttatcaaaccagtttaaagcaaaaggctttctgtttcacaaggtgtctaag
tacaacctttgccagaaactctgcaatctttacaaaaccaatggcgcctgtttcgattac
caggtacaccaatgcaacggtgcctgtataggccaggaaagtccggaagtatacaacgcg
cgcgtggatgcggccatagaatctttcacctttgaacacaacagctttgtgattatcggt
aaaggccgtgaacccggcgaaaaatcggtggtcgtgattgaaaacggcacctaccttggc
tttggttttgtggatgagtatttctctgcggctgcactggaagactttaaaggtgctatt
accaggtataacgacaacaaagacatacagcagattatccgcgggcatatgcgcggcaaa
aataaagacaaggtaattgtgttcgattga
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