Pontibacter sp. SGAir0037: C1N53_05010
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Entry
C1N53_05010 CDS
T09933
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pont
Pontibacter sp. SGAir0037
Pathway
pont03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N53_05010 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pont03019
]
C1N53_05010 (recQ)
03400 DNA repair and recombination proteins [BR:
pont03400
]
C1N53_05010 (recQ)
Enzymes [BR:
pont01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N53_05010 (recQ)
Messenger RNA biogenesis [BR:
pont03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1N53_05010 (recQ)
DNA repair and recombination proteins [BR:
pont03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1N53_05010 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_IclR
Rhodanese
Helicase_Sgs1
HTH_5
GARS_N
HTH_11
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QCR21764
UniProt:
A0A4P8RMP8
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All DBs
Position
1191070..1193205
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AA seq
711 aa
AA seq
DB search
MDIREAREALKLYFGYEKFRPMQEQIISSILGGKDVVVLMPTGGGKSVCYQVPAVVMKGI
CVVVSPLIALMKDQVEALLVNGITAAYLNSTQASDEQYKIESACLSGNIKLLYVSPEKLL
SAGFMSFLQRINVSLFAVDEAHCISAWGHDFRPEYTQLKALKQQFPSIPVVALTATADRL
TQKDIQEQLYLQNPAVFVASFDRPNINLMVRPGKDRLKRITDFLERRHKQPGIVYCLSRN
ATESLATKLKAHGYKATYYHAGMPAAKRAKAQEEFLKDDVQIVCATVAFGMGIDKSNVRW
VIHYNLPKNIEGYYQEIGRAGRDGAASDALLFYSYADVMNMRTMLSEGNNEKQNELQLVK
LERMQQYAEASICRRRILLQYFGEVMEKDCGNCDICRNPPVSFDGTTIAQKALSAIARMQ
ERANMGLLIDVLRGSRSSQVLQGGYERIKTYGAGREVGSLDWQRYLHQMLNAGLVELAYD
QNYTLKLTAQSKQVLFEGRKVQLVKFEEVKQQEEAAAVKARPKRELIKDALFERLRALRK
QLADELNVPPYVIFTDSTLQEMAAEKPSNRIAMLAISGVGSQKFERYGHDFITEIINFVT
EEQNKGNKVKGATHLITLEGYKQGLSPEDIAAQRNLNPVTIYSHLATLYEEGYPVRIEDF
VSKNEYKAISKAIAVLGEDAKLKDLFDFLKEEYPYFKIRLSLSVFKKTKVA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagggaggcacgggaagcactaaagctttactttggatacgaaaaattccgc
cccatgcaggagcagatcatctccagcattttaggtggtaaagatgtagtggttttaatg
ccaaccggtggtggtaaatcagtctgctaccaggttccggctgtcgtcatgaaaggcatt
tgtgtggttgtgtcgccgcttatcgcccttatgaaagaccaggtagaggcactgttggtg
aatggaataacggctgcctacctcaacagtacccaggcctccgatgaacagtacaaaata
gaaagtgcctgcttatccggtaatattaaactgctgtatgtttcgcctgaaaagctgctt
tcagccgggtttatgtctttcctgcaaagaataaatgtttctctttttgctgtggacgaa
gcacactgtatttctgcctggggccacgatttcaggccggagtatacgcagctgaaggca
ttgaagcagcaatttccttctataccggttgtggcacttaccgctaccgccgatcgccta
acgcaaaaagatattcaggagcaactttacctgcaaaaccctgctgtgtttgttgcttct
ttcgacaggcccaatattaacctgatggtgcgccccgggaaagaccgtttaaaaagaatc
acggatttcttggagcggaggcataaacagccaggcattgtgtactgcctgagccgcaac
gcaaccgaatcgctggctacaaaattaaaagcccatggctacaaagctacttattatcat
gccggaatgccggcagccaagcgggccaaagcgcaggaggagtttctgaaagatgatgtg
cagattgtctgtgccacagtggctttcgggatgggaatagacaaatcgaatgtgcgctgg
gtcattcactataacctgcctaaaaacatcgagggctactaccaggaaatcggacgggcc
ggtcgggacggtgctgcttctgacgcgctattgttttatagttacgccgatgtgatgaac
atgcgcaccatgctctctgaaggaaataacgagaagcagaatgagctgcaactggtaaaa
ctggagcgaatgcagcagtatgccgaggcttctatctgccgcaggcgaattttgctgcag
tattttggcgaggtaatggagaaagactgcggcaactgcgatatatgccgcaaccctcct
gtatccttcgatggcacaacaattgcccagaaggcgctttcggctatagcccgcatgcag
gaaagagcaaacatgggcctgctgattgatgtgctccggggctccaggagcagccaggta
ctgcagggaggttacgaacggattaaaacctacggtgcagggcgtgaagttggttctctg
gattggcagcgttacctgcaccagatgctgaatgccggtctggtggagctggcgtatgat
cagaactataccttaaagctgacggcgcagagcaagcaggtgctttttgaaggccgcaaa
gtgcagctggtgaagtttgaagaagtaaaacagcaggaagaggcggcagctgtaaaggca
aggccgaaacgcgagcttataaaagatgcgctgttcgaacgactgcgtgccttgcgcaag
caactggcagatgagttaaatgtaccgccttatgttatcttcactgacagcaccttacag
gaaatggcggcagagaaaccctccaatcgtattgccatgctggcaatttccggtgtgggt
tctcaaaagttcgagcgctacgggcatgactttattaccgaaatcatcaattttgtaacg
gaagagcagaacaaaggcaacaaagtaaaaggtgcgacgcacctgatcaccttagaaggg
tataagcaaggcttaagtcctgaagatattgcagctcagcgaaacctgaatcctgttacc
atttattctcacctagcaactttatacgaggagggatatccggttcgaatagaagatttt
gtgtctaagaacgaatataaagctatttccaaggctattgccgtattaggagaagacgcc
aaactaaaggacctgtttgattttctgaaggaagaatacccgtactttaaaatccggctt
tccctttcagtatttaaaaaaacgaaggttgcttaa
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