Pontibacter sp. SGAir0037: C1N53_10810
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Entry
C1N53_10810 CDS
T09933
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pont
Pontibacter sp. SGAir0037
Pathway
pont03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C1N53_10810 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pont03400
]
C1N53_10810 (xseB)
Enzymes [BR:
pont01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C1N53_10810 (xseB)
DNA repair and recombination proteins [BR:
pont03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C1N53_10810 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Fy-3
RPW8
DUF6466
TBCA
STX6_10_61_N
CXCXC
DprA_WH
DUF5962
DUF16
Baculo_PEP_C
DUF4407
MG280
Motif
Other DBs
NCBI-ProteinID:
QCR22782
UniProt:
A0A4P8RDA9
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All DBs
Position
2619137..2619403
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AA seq
88 aa
AA seq
DB search
MTNKDIQSMTYREATQELEEILRAIENDSVDVDELTQKVQRSSQLIKLCKEKLRNAENAI
NQVFNEENCEAPGSRAPEEKGAATGKLF
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaagatatacaaagcatgacttaccgggaggcaacgcaggagctggaggaa
atactacgagccatagaaaacgactcggtagatgtggatgaacttacccagaaagtgcag
cgctcttcgcagcttattaagctgtgcaaagaaaagcttcgcaatgccgagaatgccatc
aatcaggtttttaatgaagaaaattgcgaggcacctggctccagggctccggaagagaag
ggtgctgccacaggcaaactgttttaa
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