Pontibacter sp. SGAir0037: C1N53_13435
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Entry
C1N53_13435 CDS
T09933
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pont
Pontibacter sp. SGAir0037
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pont03016
]
C1N53_13435 (thpR)
Enzymes [BR:
pont01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C1N53_13435 (thpR)
Transfer RNA biogenesis [BR:
pont03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C1N53_13435 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QCR23242
UniProt:
A0A4P8REI3
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All DBs
Position
3264065..3264619
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AA seq
184 aa
AA seq
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MRDEIRLFVAATLPAQAKEFLMQRLSPFHHPAVRVIPEQNLHLTLFFIGNVSKEQLPAIR
HKIEQVAQQHTAFTLELEQLEPGPKFRSPRLVWARFKPDATFEQLSTALTQALAKAPPKQ
QKAIPHVTLARFRKDKPVPANLPHIIPDELLQLPVNTVALWQSELASPHPVYSVLESYPL
KPNL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgagatcaggctttttgtagcagccacattgccagctcaagcaaaagaattt
ttaatgcagcgcctttctccctttcaccatccggcagtacgtgttatacctgagcagaac
ctacacctcacgctgttttttattggtaacgtgagcaaagagcaactgccagccattcgg
cataaaattgagcaggtggcccaacagcataccgcctttacattggagctggagcaactg
gaacccggtccgaagttccgctctccacgcctggtgtgggcccggtttaaacctgatgcc
actttcgagcaattaagtacggcgcttactcaagccttagccaaagcgcctccgaagcag
caaaaggcaataccccacgttacgctggcccgattcagaaaagacaaacctgtacctgca
aatttaccgcacattatacccgatgaattgctgcagctacctgtaaacacagttgcctta
tggcaatccgaactggcttccccgcatcctgtttattctgttctggaaagctatccgctt
aaaccaaacctatag
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