Pontibacter sp. SGAir0037: C1N53_15215
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Entry
C1N53_15215 CDS
T09933
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pont
Pontibacter sp. SGAir0037
Pathway
pont03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pont00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N53_15215 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pont03019
]
C1N53_15215 (rny)
Messenger RNA biogenesis [BR:
pont03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1N53_15215 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
POX
ATP-synt_B
Peptidase_S46
DUF4954
Motif
Other DBs
NCBI-ProteinID:
QCR23558
UniProt:
A0A4P8RFN1
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Position
complement(3653840..3655405)
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AA seq
521 aa
AA seq
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MPNILYILLTAIVALGVGVYIGRVMLLKLYKQQEEAARLKAKSIVREAELSAESLKKDRI
LEAKEKYLRLKSEFEEEVNKKKNIIIQNENKVKQREQHVAKQMEQTKRRETELDKEKETL
TQQLEGLKKRKEEVEHQHNEVVAQLERIAGLTAAEAREQLVEALKSEAQSHASSYVKDIV
AQAKLTATKEAKKIVVETIQRTAAEHAIENCVSVFNIESDDIKGKIIGREGRNIRALEAA
TGVEIIVDDTPEAIIISGFDPVRREVARLSLHRLVADGRIHPARIEEVVAKTRKNIDEEI
VEIGERTAIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVK
HAKRAGLLHDIGKVTTEEPELPHAIIGMELAKKYKEHPDVCNAIGAHHDEVEMTAMISPL
IQACDAISGSRPGARREIMESYIKRLKDLEEAAVSFDGVNQCYAIQAGRELRVMVDADNV
TDEKAAQLSFDISQKIEKEMQYPGQIKICVIREMRAISYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatattctttacattttattaaccgctatagtggcgctcggtgtgggcgtttac
ataggacgggtgatgctgcttaagctttataagcagcaggaggaagctgcacgtctgaaa
gcgaaatctattgtacgcgaagctgaactcagtgctgaaagtcttaaaaaagaccgtatt
ctcgaagcaaaagaaaaatatcttcgccttaaatcagagtttgaggaagaggtaaacaag
aagaaaaacatcattatccagaatgaaaataaggtaaagcagcgtgagcagcatgttgcc
aagcaaatggagcaaaccaagcgccgcgaaacagaactggataaagaaaaagaaacgctt
acccagcaattggaaggccttaaaaagcgcaaagaagaagtagagcaccagcacaatgaa
gtggtggcacagttagagcgcattgccggtttaacagctgctgaagcccgtgagcaatta
gtggaagccctgaaaagcgaagctcagtcgcatgcctcttcttatgtaaaagacattgta
gctcaggccaaacttaccgcaaccaaagaagctaaaaagatcgtggtggaaaccattcag
cgtactgctgctgagcatgccatcgaaaactgtgtttccgttttcaacatagagagcgac
gacatcaaaggtaagattattggtcgtgaaggccgtaacatccgtgctttagaggcggct
accggtgttgaaattattgtagacgatacgccagaggctatcattatctctggttttgat
ccggttcgccgcgaggtagcacgtttatcgttgcaccgcctggtagccgatgggcgtatt
cacccggcccgtattgaggaagtggtggccaaaacccgtaaaaacatcgacgaagaaatt
gtggaaatcggagagcgcactgccatagatttaggtatacacgggctacacccggaactg
atcaagatggtaggtcgtatgcgtttccgctcttcttacggtcagaacctgctgcagcac
tcgcgcgaggtggcgaacctttgtgctaccatggcggcagagcttgggctgaatgtaaaa
catgctaaacgtgccggcctgttacacgatattggaaaagtaactacagaagaacctgag
ttgccacacgccattattggtatggaactggcgaaaaaatacaaagagcatccggatgtt
tgcaatgccatcggtgctcaccacgacgaagtggaaatgaccgctatgatttctcctctc
attcaggcctgtgatgctatttctggttcaagaccaggtgcacgccgcgaaataatggag
tcgtatatcaagcgcctgaaagatttagaagaagcagctgtttcgtttgatggtgtaaac
cagtgctacgccatacaagcaggtcgcgaattacgtgtaatggtagatgccgacaatgta
accgatgagaaagcagcccaactatcatttgatatctcacagaaaatcgaaaaagagatg
cagtatcctggccagatcaagatctgtgttatccgtgagatgagagccatcagctatgcc
aaataa
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