KEGG   Pontibacter sp. SGAir0037: C1N53_15215
Entry
C1N53_15215       CDS       T09933                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pont  Pontibacter sp. SGAir0037
Pathway
pont03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pont00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1N53_15215 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pont03019]
    C1N53_15215 (rny)
Messenger RNA biogenesis [BR:pont03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C1N53_15215 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B POX ATP-synt_B Peptidase_S46 DUF4954
Other DBs
NCBI-ProteinID: QCR23558
UniProt: A0A4P8RFN1
LinkDB
Position
complement(3653840..3655405)
AA seq 521 aa
MPNILYILLTAIVALGVGVYIGRVMLLKLYKQQEEAARLKAKSIVREAELSAESLKKDRI
LEAKEKYLRLKSEFEEEVNKKKNIIIQNENKVKQREQHVAKQMEQTKRRETELDKEKETL
TQQLEGLKKRKEEVEHQHNEVVAQLERIAGLTAAEAREQLVEALKSEAQSHASSYVKDIV
AQAKLTATKEAKKIVVETIQRTAAEHAIENCVSVFNIESDDIKGKIIGREGRNIRALEAA
TGVEIIVDDTPEAIIISGFDPVRREVARLSLHRLVADGRIHPARIEEVVAKTRKNIDEEI
VEIGERTAIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVK
HAKRAGLLHDIGKVTTEEPELPHAIIGMELAKKYKEHPDVCNAIGAHHDEVEMTAMISPL
IQACDAISGSRPGARREIMESYIKRLKDLEEAAVSFDGVNQCYAIQAGRELRVMVDADNV
TDEKAAQLSFDISQKIEKEMQYPGQIKICVIREMRAISYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgcccaatattctttacattttattaaccgctatagtggcgctcggtgtgggcgtttac
ataggacgggtgatgctgcttaagctttataagcagcaggaggaagctgcacgtctgaaa
gcgaaatctattgtacgcgaagctgaactcagtgctgaaagtcttaaaaaagaccgtatt
ctcgaagcaaaagaaaaatatcttcgccttaaatcagagtttgaggaagaggtaaacaag
aagaaaaacatcattatccagaatgaaaataaggtaaagcagcgtgagcagcatgttgcc
aagcaaatggagcaaaccaagcgccgcgaaacagaactggataaagaaaaagaaacgctt
acccagcaattggaaggccttaaaaagcgcaaagaagaagtagagcaccagcacaatgaa
gtggtggcacagttagagcgcattgccggtttaacagctgctgaagcccgtgagcaatta
gtggaagccctgaaaagcgaagctcagtcgcatgcctcttcttatgtaaaagacattgta
gctcaggccaaacttaccgcaaccaaagaagctaaaaagatcgtggtggaaaccattcag
cgtactgctgctgagcatgccatcgaaaactgtgtttccgttttcaacatagagagcgac
gacatcaaaggtaagattattggtcgtgaaggccgtaacatccgtgctttagaggcggct
accggtgttgaaattattgtagacgatacgccagaggctatcattatctctggttttgat
ccggttcgccgcgaggtagcacgtttatcgttgcaccgcctggtagccgatgggcgtatt
cacccggcccgtattgaggaagtggtggccaaaacccgtaaaaacatcgacgaagaaatt
gtggaaatcggagagcgcactgccatagatttaggtatacacgggctacacccggaactg
atcaagatggtaggtcgtatgcgtttccgctcttcttacggtcagaacctgctgcagcac
tcgcgcgaggtggcgaacctttgtgctaccatggcggcagagcttgggctgaatgtaaaa
catgctaaacgtgccggcctgttacacgatattggaaaagtaactacagaagaacctgag
ttgccacacgccattattggtatggaactggcgaaaaaatacaaagagcatccggatgtt
tgcaatgccatcggtgctcaccacgacgaagtggaaatgaccgctatgatttctcctctc
attcaggcctgtgatgctatttctggttcaagaccaggtgcacgccgcgaaataatggag
tcgtatatcaagcgcctgaaagatttagaagaagcagctgtttcgtttgatggtgtaaac
cagtgctacgccatacaagcaggtcgcgaattacgtgtaatggtagatgccgacaatgta
accgatgagaaagcagcccaactatcatttgatatctcacagaaaatcgaaaaagagatg
cagtatcctggccagatcaagatctgtgttatccgtgagatgagagccatcagctatgcc
aaataa

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