Polaromonas sp. Pch-P: F7R28_00375
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Entry
F7R28_00375 CDS
T06273
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo00061
Fatty acid biosynthesis
poo00071
Fatty acid degradation
poo01100
Metabolic pathways
poo01212
Fatty acid metabolism
poo02024
Quorum sensing
poo04146
Peroxisome
Module
poo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F7R28_00375
00071 Fatty acid degradation
F7R28_00375
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F7R28_00375
09145 Cellular community - prokaryotes
02024 Quorum sensing
F7R28_00375
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
poo01004
]
F7R28_00375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poo04147
]
F7R28_00375
Enzymes [BR:
poo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F7R28_00375
Lipid biosynthesis proteins [BR:
poo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F7R28_00375
Exosome [BR:
poo04147
]
Exosomal proteins
Exosomal proteins of breast milk
F7R28_00375
Exosomal proteins of breast cancer cells
F7R28_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QGJ16995
UniProt:
A0A5Q3H5G8
LinkDB
All DBs
Position
87500..89185
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AA seq
561 aa
AA seq
DB search
MNKHWLKSYPEGVSHEINTEQFHSLSHLLEDSFKKNAAKPFSVCMDRWMSYGQLDELSSA
FGAWLQSLGLEPGARVAIMLPNVPQFAVTMAAILRAGYTCVNVNPLYTARELEHQLRDSG
ATTIVILENFAATLAEVIERTQVKNVVMAAMGDLLGFWYGQWITFAVRHLAKLVPAYKLP
LGEGRTVTAFNRAVAEGSRLTLRPAQTTLDSIAFLQYTGGTTGLSKGAVLTHRNIVAAIL
QAEEWFTPALKRVGDVSKTNNIAALPLYHIFALTLCLLTIRWGAHLTLIPNPRDFGKFIE
VLKKRPFHMLPAVNTLFNALLQHPQFKTVDFSNLCVSQAGGMAASEGTAKHWLEVTGCPM
IEGWGMSETCAIGTNNPVTNKEFTGTIGLPLPSIEVAIKDDDGKSLALGESGEICIKGPQ
VMTGYYRQAEENKKAFTSDGFMRTGDIGIMDERGYTKIIDRKKDMIIVSGFNVFPNELEN
VISLCPGVIECAAIGIADEKQGEAIKVFVVKNDPTLTEDDVSAYCKQHLTGYKRPKYIEF
RDDLPKTNVGKILRRELRTAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcattggctcaagagttatccagaaggcgtctcgcacgagatcaacaccgag
cagttccactcgctctcgcacctgcttgaagactcgttcaagaagaacgcagccaaaccg
ttttcggtttgcatggaccgctggatgagctacggtcagctcgacgagctgtcctcggcc
ttcggggcctggctgcaaagcctggggctcgagcctggcgcccgcgtggcgatcatgttg
ccgaatgtgccgcagttcgccgtcaccatggccgccatcttgcgcgcgggttacacctgc
gtgaatgtcaacccgctctacacggcgcgcgagctggagcaccagctccgggattccggg
gcaacgaccatcgtcatccttgaaaactttgcggccacactggccgaagtgattgagcga
acacaggtgaaaaatgttgtgatggccgccatgggcgatttgctcggcttttggtatggg
caatggatcacttttgcggtccgccatctcgccaagctggtgcctgcctacaagttgccg
ctgggcgaagggcgcaccgtgacggcctttaatcgcgcggttgcggaaggcagccgcctg
acactgcggcccgcgcagaccacgctggattcgattgcgttcctgcaatacaccggcgga
accaccgggttgtcaaaaggtgccgtgctcacacatcgcaacatcgtggcggccattttg
caggcagaagaatggttcacccccgcgctcaaacgtgtcggcgacgtcagcaagaccaat
aacatcgcggcgttgccgctgtatcacatcttcgcgctcacgctatgcctgctcaccata
cgctggggcgctcacctgacgctcattccgaatccgcgggacttcggcaagttcatcgag
gttctgaaaaaacggccctttcacatgttgccggcggtcaataccctcttcaatgcgctg
cttcaacatccgcaattcaagaccgtggacttttcaaacctctgcgtttctcaggcaggc
ggcatggccgcgtctgaagggacggcaaaacactggctggaagtgacgggttgccccatg
atcgaaggctggggcatgagcgagacatgcgccatcggcaccaacaatcccgtgaccaac
aaggagttcaccggaacgatcggcctgccgttgccgagcattgaggtggccatcaaggat
gacgatggaaagtcgctggcgctcggtgaatccggcgaaatctgcatcaagggcccacag
gtcatgacgggctattaccggcaagccgaagaaaacaagaaggcctttacgtcagacggc
ttcatgcgaaccggcgatatcggcatcatggacgaacgtggttacaccaaaatcatcgat
cgcaagaaagacatgatcattgtttcgggctttaacgtatttcccaatgagcttgagaac
gtcatttccctgtgccccggcgtcattgaatgcgccgccatcggcattgccgacgaaaag
caaggtgaagcaatcaaggtttttgtggtcaaaaacgaccctacactgactgaagacgac
gtcagcgcctactgcaagcagcatctgacgggctacaaacgacctaaatacattgaattc
cgcgatgacctacccaaaaccaatgtcggaaaaatcctcaggcgtgagctgcgcacagcg
gcctga
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