Polaromonas sp. Pch-P: F7R28_05745
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Entry
F7R28_05745 CDS
T06273
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo00521
Streptomycin biosynthesis
poo00523
Polyketide sugar unit biosynthesis
poo00525
Acarbose and validamycin biosynthesis
poo00541
Biosynthesis of various nucleotide sugars
poo01100
Metabolic pathways
poo01110
Biosynthesis of secondary metabolites
poo01250
Biosynthesis of nucleotide sugars
Module
poo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
poo_M01026
dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F7R28_05745 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F7R28_05745 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
F7R28_05745 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F7R28_05745 (rfbB)
00525 Acarbose and validamycin biosynthesis
F7R28_05745 (rfbB)
Enzymes [BR:
poo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
F7R28_05745 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QGJ20738
LinkDB
All DBs
Position
1213752..1214816
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AA seq
354 aa
AA seq
DB search
MILVTGGAGFIGANFVLDWLAGTDEPVVNLDKLTYAGNMETLDPLKGDPRHIFVRGEIGD
SALVADLLARHKPRAIVHFAAESHVDRSIADPEEFIQTNIVGTFRLLEAARQFWNGLPAG
EKGAFRFLQVSTDEVYGSLQPADPAFSETNRYEPNSPYSASKAASDHLARAYHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQVRDWLYVKDHCSGIRRVLEA
GKPGETYNIGGCNEKPNLDIVHAVCALLDELRPRSSGSYREQVAFIKDRPGHDRRYAIDA
GKIMQELGWKPAETFETGIRKTVQWYLDNPEWVNHVQSGAYRDWVEAQYAATSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgattttggttacagggggagccggatttatcggcgccaactttgtcctcgactggctg
gcgggcaccgacgagccggtcgtcaacctggacaaactcacctatgcgggcaatatggaa
accctggaccccctgaagggtgatccacggcatatttttgtccggggcgagatcggcgac
agcgccctggtcgcggacttgttggcccggcacaaacctcgcgcgatcgttcactttgca
gccgagtcgcatgtagaccggtcgattgcggaccctgaagaattcatccagaccaacatc
gtcggcacctttcgcttgctggaagcagcgcgccagttctggaacggcctgcctgccggc
gagaagggcgcgtttcgtttcctccaggtctctaccgatgaggtttatggctccttgcag
cctgccgacccggcctttagcgagaccaaccggtatgagccgaacagtccctattcggcc
agcaaggctgccagcgaccatctggcccgggcctatcaccacacctacggcctgccagtg
ctcaccaccaactgctccaacaattacgggccctaccacttccctgaaaagctgattccg
ctcatgatcgtcaacgcccttgccggcaagcccctgccggtctatggcgacggccagcag
gtgcgcgactggttgtacgtcaaagaccactgcagcggcattcgccgcgtgctcgaagcc
gggaaacccggcgagacctacaacatcggcggctgcaacgaaaaaccgaatctcgacatc
gtccatgcggtttgcgcgttgctcgatgaactgcgcccacgcagcagtggcagctaccgc
gaacaggtggccttcatcaaggacaggcccggccatgatcgccgttacgcgattgatgcc
ggcaagatcatgcaggagcttgggtggaagcctgctgaaactttcgaaaccggcattcgc
aagaccgtccagtggtacctggacaatcctgaatgggttaaccatgtacagagcggtgcc
tatcgtgattgggtcgaggcccaatatgcggcgacctcatcctga
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