Polaromonas sp. Pch-P: F7R28_08890
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Entry
F7R28_08890 CDS
T06273
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F7R28_08890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poo03019
]
F7R28_08890
03009 Ribosome biogenesis [BR:
poo03009
]
F7R28_08890
Messenger RNA biogenesis [BR:
poo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F7R28_08890
Ribosome biogenesis [BR:
poo03009
]
Eukaryotic type
Pre-60S particles
RNases
F7R28_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QGJ18494
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All DBs
Position
1874878..1875441
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AA seq
187 aa
AA seq
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MPETEPLLKKSDQNLVWLDCEMTGLDPEKERLIEIAVIVTGPQLTPRIEGPVLAIHQTDE
LLDQMDAWNKGTHGRSGLIDKVKASTVDEADAEAQILAFLAQYVPKGVSPLCGNTISQDR
RFLVKYMPKLEAFLHYRNIDVSTFKELAKRWRPEVYSAFKKRQSHTALADVHESIDELEH
YREHFLK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaactgaacccctactcaaaaaatcagaccagaacctcgtctggctcgactgc
gaaatgaccgggctggacccggaaaaagagcgcctcattgaaattgccgtcatcgtgacc
ggcccgcaactcacgccgcgcatcgaaggccccgtcctggctatccaccagaccgacgag
ttgctggaccagatggacgcctggaacaagggcacccacggccgcagcggcctgatcgac
aaggtcaaggccagcacggtggacgaggcggacgccgaggcgcagatactggccttcctg
gcccagtacgtgcccaagggcgtttcacccctgtgcggcaacaccatcagccaggacagg
cgcttcctggtcaagtacatgcccaagctggaggccttcctgcattaccgcaacatcgac
gtgagcaccttcaaggagctcgccaagcgctggcggcccgaggtctacagcgctttcaag
aagcggcaaagccatacggcactggccgatgtgcacgaatccatcgacgagctggaacat
taccgggaacacttcctgaagtga
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