Polaromonas sp. Pch-P: F7R28_08965
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Entry
F7R28_08965 CDS
T06273
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo03420
Nucleotide excision repair
poo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7R28_08965
03430 Mismatch repair
F7R28_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poo03400
]
F7R28_08965
Enzymes [BR:
poo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7R28_08965
DNA repair and recombination proteins [BR:
poo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7R28_08965
MMR (mismatch excision repair)
Other MMR factors
F7R28_08965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
QGJ18508
UniProt:
A0A5Q3HAC7
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Position
1893176..1895611
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AA seq
811 aa
AA seq
DB search
MFSEVAPTSPLLQNLNPEQLAAVTLPATHALILAGAGSGKTRVLTTRIAWLLQTGQVSPG
GILAVTFTNKAAKEMMARLSAMLPVNVRGMWIGTFHGLCNRFLRAHYKLANLPQSFQILD
TQDQLSAIKRLCKQHNVDDERFPPKQLMWFIAGNKEDGLRAKDVQVRDEEGRKKVEIYAL
YEEQCQREGVVDFGELMLRSYELLRDNAPVREHYQRRFRHILIDEFQDTNKLQYAWIKML
AGQGPDATQGAGAMPGGSVVAVGDDDQSIYAFRGARVGNMADFVREFEVTHQIKLERNYR
SFGNILDSANELISHNSKRLGKNLRTEAGPGEPVRVHESPTDFAEAQWFVDEVKQLVRDG
TERKEIALLYRSNAQSRVMETALFNAGVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFMRVVNFPPRGIGARSLELLQDTARAAGCSLHDGVSAVSGKAGANLGAFVAKIDVLRE
QTLKLSLREIIELVLQHSGLEEHYKTEKEGQDRLENLAELVNAAESFVSQEGFGRDAVAL
PVDELGARLTQSPASQGLDASAPLVNEPLPEALAPDTETGETLSPLAAFLTHAALESGDN
QAQAGQDAVQLMTVHSSKGLEFDCVFITGLEDGIFPHENSMSDRDGLEEERRLMYVAITR
ARKRLYLSYSQTRMLHGQTRYNLKSRFFDELPEAALKWITPKNQGFASGMGSGNWGGASN
SGAEGGRRDWASSVFSSKSGATERFASPPVPPQKNAPSHGLKSGMEVFHAKFGEGKVMML
EGSGDDARAQINFTRHGVKWLALSVAKLTVV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagaagtcgcgccaacatccccactcttacaaaatcttaacccggagcaactc
gccgctgtcactttgcctgccacgcacgcgctgatcctggcgggggccggctccggcaag
acgcgggtgctgacgacgcgcatcgcctggctgctgcagaccggccaggtctcgccgggc
ggcatcctggccgtcaccttcaccaacaaggcggccaaggaaatgatggcgcgcctgtcg
gccatgctgccggtgaatgtgcgcggcatgtggataggcactttccacggcctgtgcaac
cgctttttgcgcgcgcactacaagctggccaacctgccgcagagcttccagatcctggac
acgcaagaccagctctcggccatcaagcgcctgtgcaagcagcacaacgtcgacgacgag
cgctttccgcccaagcagctgatgtggtttatcgccggcaacaaggaagacggcctgcgc
gccaaggatgtgcaggtgcgcgacgaagaaggccgcaagaaggtcgagatttacgccctt
tatgaagagcagtgccagcgcgaaggcgtggtcgatttcggcgagctcatgctgcgcagt
tatgaactgctgcgcgacaacgcgccggtgcgcgagcattaccagcggcgctttcgccat
atcctgatcgacgagttccaggacaccaacaagctgcagtacgcctggatcaagatgctg
gccgggcaggggcccgatgcgacccagggcgccggtgcgatgcccggcggctcggtggtg
gcggtgggcgacgacgaccagagtatttatgcctttcgcggcgcgcgcgtgggcaacatg
gccgactttgtgcgcgagttcgaagtcacgcaccagatcaagctggagcgcaactaccgc
agcttcggcaatatcctcgactcagccaacgaactcatcagccacaacagcaagcgcctg
ggcaaaaacctgcgcaccgaggccggccccggcgagccggtgcgcgtgcatgagtcgccc
acagactttgccgaagcgcagtggtttgtcgatgaggtcaagcaactggtgcgtgacggc
acggagcgcaaggagatcgcgctgctgtaccgcagcaatgcgcaaagccgggtgatggaa
acggcgctctttaatgcgggtgtgccataccgcgtgtacggcggcctgcgctttttcgag
cgcgctgaaatcaagcacgcgctggcctacctgcgcctgctggagaacccgcacgacgac
accagcttcatgcgcgtcgtcaactttccgccgcgcggcatcggcgcgcgcagccttgag
ctgctgcaggacaccgcgcgcgccgcgggctgctcgctgcacgacggcgtgagcgccgtg
agcggcaaggccggcgccaacctgggcgccttcgtggccaagattgacgtgctgcgcgag
cagacgctgaaactgagtctgcgcgagatcatcgagctggtgctgcagcacagcgggctg
gaagagcactacaaaactgaaaaagaaggccaggaccgtctggagaacctggccgaactg
gtcaacgcggccgagtccttcgtcagccaggaaggttttggccgcgacgcggtggcgctg
ccggtcgatgagctgggcgcgcgcctcacgcagtcgccggccagccaggggctggatgca
tctgcgccgctcgtgaacgagccgttgccggaggcgctggcacccgacaccgaaaccggc
gagacgctgtcgccgctggcggctttcctcacgcatgccgcgctggagtccggtgacaac
caggcgcaggccgggcaagacgcggtgcagctcatgacggtgcattcgtccaagggcctg
gagtttgactgcgtcttcatcaccggcctggaagatggcatcttcccgcacgaaaattcg
atgagcgaccgcgacggcctggaggaagaacgccgcctgatgtatgtggcgatcacacgc
gcgcgcaagcgcctgtacctcagctattcgcaaacgcgcatgctgcacggccagacgcgc
tacaacctcaagagccgcttttttgacgagctgccggaagccgccctcaaatggatcacg
ccgaagaaccagggttttgcgtcgggcatgggctcgggcaactggggtggtgctagcaat
tcaggagcagaaggtgggcgcagggattgggccagcagcgttttttcttcaaaatccggc
gcaaccgagcgctttgccagcccgccggtgccgccgcaaaagaatgcgccttcgcatggc
ctgaaaagcggcatggaagtgttccatgccaagtttggtgaaggcaaggtgatgatgctc
gaaggcagcggcgacgatgcccgtgcgcagatcaacttcacgcgccacggggtgaagtgg
ctggccctgagtgtggcgaagctgacagtggtgtag
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