Polaromonas sp. Pch-P: F7R28_19060
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Entry
F7R28_19060 CDS
T06273
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo02020
Two-component system
poo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F7R28_19060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F7R28_19060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poo03000
]
F7R28_19060
Transcription factors [BR:
poo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
F7R28_19060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
MarR
TrmB
HTH_24
MarR_2
HTH_Cmi2_C
HTH_11
GntR
Rrf2
WHD_DUF6293
DUF7343
RepL
HTH_6
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
QGJ20285
LinkDB
All DBs
Position
complement(4070149..4070826)
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AA seq
225 aa
AA seq
DB search
MTTMVSNLELIRRVPLFSVLTAAQAASVADTVVKRRFKRGEPIVEQGKKSNALSIILTGR
ARVVTTDSRGREVILATMHPGDYVGEMSLIDNEPHSATVRAEIQTDALILGRLEFARCLP
ENSSMAYAVLKGLVQRLRHADRQIESLALMDVYGRVARALLEFANEDGSGNAVIRDKVSR
QDLAKMVGASREMVSRVMKDLEERGFIETREDGSVLVKERLHTLG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatggtgtccaacctggaattgattcgccgggtgccccttttctctgtattg
acagccgcccaggctgcctccgttgccgataccgtggtcaagcgccgtttcaagcgcggc
gaaccgatcgtcgagcagggcaaaaaatccaatgccctgtccatcatcctgacgggacgg
gcccgcgtcgtcaccaccgactcccgcggccgcgaagtcatcctggccaccatgcacccg
ggcgactatgtgggggagatgagcctgatcgacaacgagccgcattcagccacggtgcgc
gccgagatccagaccgacgccctgatcctgggccgcctcgaattcgcacgctgcctgccc
gagaacagctccatggcgtacgccgtgctcaagggcctggtacagcgcctgcgccacgca
gaccgtcagatcgaatcgctggcgctgatggacgtatacggccgcgtggcaagggcattg
ctggagttcgccaatgaagacggcagcggcaacgccgtcatccgcgacaaggtgtcgcgt
caggatctggccaaaatggtcggcgcttcacgcgagatggtcagccgggtgatgaaagac
ctcgaagagcgcggcttcatcgaaacccgcgaggacggctctgtcctggtcaaggaacgg
ttgcataccctgggttaa
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