Populus trichocarpa (black cottonwood): 112323276
Help
Entry
112323276 CDS
T01077
Name
(RefSeq) probable disease resistance protein At4g27220
KO
K13459
disease resistance protein RPS2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112323276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_RPS2
LRR_8
LRR_14
WHD_DRP
LRR_R13L1-DRL21
ATPase_2
LRR_4
LRR_Zer-1
NACHT
AAA_22
LRR_EndoS
KAP_NTPase
NPHP3_N
zf-BED
AAA_16
AAA_14
AAA_18
LRR_13
Motif
Other DBs
NCBI-GeneID:
112323276
NCBI-ProteinID:
XP_024445451
LinkDB
All DBs
Position
18:complement(15755121..15761439)
Genome browser
AA seq
1093 aa
AA seq
DB search
MVLPKGPFWEHVEDMNDGSMRCKFCGHLFAKDTSISRIKCHLSGMRGRGVKICKDVPEEV
QDAALATIDGPPEKTLKTVAGSSNNEVTNAIAASAQEQNSEVIRVEMAQQGEAFYPGTLE
DWMDSIIDNEIELVLVSSSPKELPRDAFEIISGTEQVQHRERGSSHERSSINQADQPRGD
SSQPTDLLCLGLGRYCDQIYFPPVNNDVIMDDVRNMVRVRIEPEEEDVVNNSGRLVQPGT
GASSSEDLTYNTSETRGDPLPTNSTTLVGRAFVENGNVVWSWLMEDKVSTIGIYGMGGVG
KTAMLKHIYNELLKRPDICQHVYWVIVSRDFSIKRLQHSIARRIGLKHFNEKEELHRAVK
LSKELIKKQKWILILDDLWNSFELHEVGIPVPLKGCKLIITTRSEKVCHQMTCQHKIKVK
PLSDEEAWTLFTKKFEYDIPLSPKVERIAKHITRECDCLPLGIITMARCMKGVDDTHEWK
NALEDMRQSRVGQDDMKKVFRTLRFSYTRLNDSALQRCFLYCALFPENFVIPKDYLIAYF
IDEGVIKGQKSREAEFDKGHSMLNRLENVCLLEIINDGRCVKMHDLIRDMAIQIVEEDSQ
GMVKAGAQLKELPDAEEWTENLTTVSLMHNQIEEIPFCHSPRCLNLSILLLCHNYRLRFV
ADSFFKKLHGLNILDLSHTNIEKLPNSVSDLVKLTSLLLSNCKRLRHVPSLKNLGELKRL
DLSSTQALKKMPQGMEFLSNLRCLRMNGCGNKKFPSGILPKLSHLQVFVLEVELICVPVT
VKGKEVGCLRKLGTLECHFEGHSDYVEFLKSREKNQALSKYKIFVGQFKEYDVRTYCSNK
TVGLGNLSVNRDGDFQVWFPNDIQELIIEKCDDATSLCDVFSLKKCSIELEVISILNCNS
MESLVLSSWFCSATLPSPSYNSIFSGLKRFNCSGCKSMKKLFPLVLLPSLVNLEEIRVKH
CEKMEEIIGGTRSDEEGVMGEKSSNNEFKLPKLRILYLSDLPELKSICSAELICDSLKAI
EVINCQKLKRFPICLPLLENGQPSPPPSLEKIKVHPKEWWKSMVEWEHPNAKDVLCPFVE
FSQPQVRKQDEDK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggttctcccaaaaggtccattttgggagcatgttgaagatatgaatgacggtagcatg
aggtgtaagttttgtgggcatttatttgccaaggacacttccatttcgaggatcaaatgc
catttgtcagggatgagagggcgtggtgttaaaatttgtaaagatgttccagaagaagtt
caggatgcagccctagcaacaattgatggacctccagaaaaaacccttaaaactgtagca
ggctcaagcaataacgaggtcaccaatgcaattgcagcttctgcgcaagaacagaacagt
gaagtgatacgtgtagaaatggcacaacaaggagaagctttttaccctggaacactcgaa
gattggatggatagcatcattgataacgagatcgagcttgtgttggtaagtagttctcct
aaagagcttccgcgtgatgcttttgagattatatctggaacagaacaagtgcagcatcgg
gagagaggtagctctcatgagaggtcatcaattaatcaagctgatcagcctcgaggagat
tcatcccaaccaactgatctattgtgtcttgggcttggaagatattgtgatcaaatatat
tttccaccagtaaacaatgatgtgattatggatgatgtgcggaacatggttagagtgaga
atagaaccagaggaggaggatgtggtgaataatagtggaagattagtgcagcctggcaca
ggagctagctcttctgaagaccttacatacaacacaagtgagactagaggagatccatta
cccactaactctacaacgttagtgggtcgagcatttgtagagaatgggaacgtggtatgg
tcctggttaatggaagataaagtctcaaccattggtatttatgggatggggggagttggt
aaaactgcaatgctgaagcatatctataatgagcttctaaaaagaccagacatttgtcaa
catgtttattgggtgatcgtgtctcgtgattttagcattaaaagattgcagcacagtatc
gcaagacgtataggtttaaaacatttcaatgaaaaggaggagttgcacagagctgtcaaa
ttgtcaaaagaactaataaagaaacaaaaatggattctcattttagatgatttgtggaac
tcttttgagctacacgaagtgggaattcctgtcccgttgaaaggatgtaagctgattata
actactcgatcagaaaaggtttgtcatcagatgacttgccagcacaaaatcaaagtgaag
ccactttctgacgaagaagcttggactttgttcacaaagaaatttgaatatgacattcca
ctttctccaaaagtggaacgaattgcaaaacacatcaccagggagtgtgattgtttgccg
ctaggaattataacaatggctagatgcatgaagggggtggatgacacacacgagtggaag
aatgctttagaggacatgagacaatcaagagttggacaagatgacatgaaaaaggtgttc
cggactctgagatttagttatacccgcctaaatgattcagctttgcaacgatgttttttg
tactgtgcattatttcctgaaaactttgtgatccctaaagactatttgatagcttatttc
attgacgagggagtgataaaagggcagaagagcagggaggcagaatttgacaaaggtcat
tcgatgcttaatagacttgaaaatgtctgtttattggaaataattaatgatggtagatgt
gtcaagatgcatgacttgattagggacatggccatccaaatagtagaagaagactctcaa
ggcatggtcaaagcaggtgcacaactgaaagaattaccggatgcagaggagtggacagag
aatcttacaacagtttcattaatgcataaccaaattgaagaaattcctttctgccattca
ccaaggtgtctgaatctgtcaatcttattgctatgtcataattacaggttgcgatttgtg
gcagattcatttttcaagaaattgcatgggctcaacatccttgatctgtctcacacaaat
attgaaaaattgcctaattctgtctctgatttggtcaaactcacttcattgctgctctca
aattgtaagaggttaaggcatgtaccatcattaaaaaatctcggggaactaaagaggtta
gatctctctagtactcaggcacttaaaaagatgcctcaaggcatggaatttctatccaac
ctgaggtgtcttagaatgaatggatgtggtaacaagaagtttcctagtgggatattacct
aaactctctcacttgcaagtctttgtgctagaggtggagttaatttgtgttccagtaaca
gttaaaggaaaggaagtaggatgcttgaggaagttgggaactttggaatgccattttgaa
ggtcactctgactatgtggagtttctcaaatctcgggagaagaaccaagcactaagcaaa
tacaaaatttttgtaggacaattcaaggagtacgatgtaagaacatattgtagtaataag
acagttgggttgggtaatttgagtgtcaacagagatggagattttcaggtctggttccca
aatgatattcaagaactgatcattgaaaagtgtgatgatgcaactagtttgtgtgatgtt
ttctctctaaagaagtgttcaattgaattggaggtcatctccattttgaattgcaatagc
atggagagcttggttttatcttcttggttctgctctgctacacttccatctccatcgtat
aacagtatattttctggtcttaaaaggtttaattgttctggttgtaagagcatgaagaag
ttatttcctcttgtcttgctgccaagcctcgtaaacctggaagagattagagttaagcat
tgtgagaaaatggaggagataataggtggaacgagatcagatgaagaaggggttatgggt
gaaaaaagcagcaacaacgaattcaaactccccaagttaagaattttgtacttgtctgac
ttaccagaattgaaaagcatttgcagtgcagaattgatctgcgattctctcaaagcaatt
gaagtaataaattgtcagaagctaaagaggttcccaatttgtcttccattacttgaaaat
ggccagccatctcctcccccttctcttgaaaaaatcaaagtacatccaaaagaatggtgg
aagtcaatggtggagtgggagcatcctaacgctaaggatgtcctctgtccctttgtagag
ttttctcaaccacaagtaaggaagcaagacgaagacaagtga
DBGET
integrated database retrieval system
