Populus trichocarpa (black cottonwood): 112323292
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Entry
112323292 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
112323292
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
112323292
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
112323292
NCBI-ProteinID:
XP_052309827
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Position
6:17680467..17776668
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AA seq
971 aa
AA seq
DB search
MGKVIIRAGVVLDMNSAVGKMAESCISAAETDFYARNADYRTRISLATRNSKGDVVTAAS
AALDLMKNEEVEAIIGPQRSSEAKFVIELGAKTQVPILSFSATSPALTPVQSNYFIRTAQ
SDSSQVKAIASIVETYGWREIVLIYEGTEYGIALVPYLLNALHAIRTRVPYESCIPSSSD
DTEIMSELQKIKKMQESVFLVHMTASMGSRLFLLAKSAGMMSEGYAWLVTTGLSTLLDPV
DAKVMDSMEGVLGVKPYVPKSIELEGFKSRWKNNFNSENLFGLWAYDTVWAIAMAVERAG
VVHSSFLKQNASNRSVDLAALGISEMGPRLLKSILNTTFDGLSGKFQLVKGEMAPFAFEI
FNVVGRSERVIGYWTEKGGLSQSLDSSSKISHSNSKTKLKQPIWPGGTIQQPKKLRIGVP
VRSDFSEFIKVEWDQQSNEPIVSGFSAEVFLAVHDILPFPLPYEFIPFMNESSRKSAGTY
DDILRQIEHQKFDAVVGDTTIVAYRSSYVDFTLPYSESGITMVVLMKRDERDNMWIFLKP
LSPKLWLVTGVAFFVTGLVVWVLEHRTNTEFRGTPEQQLGTVIWFSFSTLVFAHRERPEN
NLTKFVLIIWIFVVLIISQSYTASLASMLTVQRMHPAFVYVTEIKRNNYFVGHPKDSFVK
DFLKKEIHFNDTMLREYNTPEEFHDALSRGSDNGGVAAIFDEIPYVRRFLNDKYRCSKFQ
MVGPTYQTDGFGFAFPLNSPLVSHISRAILNVTEDHDKTEAIKSKSFGREITCEDRGAET
SSGGLRLSSFAGLFLISGVASISSLLIYIIRFLFSNYPASNTMHEEQSMWLRILEVAKRF
DQKDPSVHHLRRAESRVHPVTGPESIGASPETGNVHEMTSNEGAEDVGENQNHDNLTSGN
SGTNFIASNADTVAPNTPEINRASPDTAYVHEMTSDEGAEVVVGDQNRGNRTSVNSGTNT
NTMLPTKISCT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtgattatacgagcaggggtggttcttgatatgaactcagctgtcggaaaa
atggcagagagctgcatatctgctgcagaaactgatttttatgctaggaatgctgattat
cgaactagaatctctcttgccaccaggaattccaaaggggatgtcgtgacagcagcatct
gcagcactggatttaatgaaaaatgaagaagttgaagcaatcatagggcctcaaagatca
tcagaagccaagtttgtgatagagcttggagccaagacacaagtgccaattctctctttt
tcagctactagtcctgctctcactccagttcaaagcaattactttatccggacagctcaa
agtgattcctctcaagtgaaagccattgccagcattgtcgaaacttatggttggagggaa
attgttctaatctatgaaggcacagaatatggcattgctttggttccatatttgctaaat
gccttgcacgcgattcgtactcgagttccctatgaaagttgcattccatcgtcttccgat
gacactgaaatcatgagcgagctccaaaaaataaagaaaatgcaggaaagcgtgtttctg
gtgcacatgacagcctccatgggatccagactattcttgctcgccaaaagcgcaggaatg
atgagtgaagggtatgcatggctcgtgacaacaggattgtccaccttattagatcctgtg
gacgcaaaagtaatggattctatggaaggtgtattaggtgtaaagccatatgtaccaaaa
tcaatagaacttgaaggtttcaaatcaagatggaaaaataatttcaactctgaaaacctc
tttggtttatgggcatatgatacagtttgggcgatagcaatggcagtggagagggctggc
gttgtgcattctagtttcttaaaacaaaacgcaagcaacaggtcagttgatcttgcggct
ttgggaatctcagaaatggggccaagactcctgaagtccatattaaacactacctttgat
ggcttgagcggaaagttccagttggttaagggtgagatggcacctttcgcctttgaaata
ttcaatgtggtggggagatcagagagggttattggatattggacagaaaaaggaggactt
tctcagagcttggatagcagtagtaaaatatcacactcaaattccaaaaccaaactgaag
caaccaatttggccaggaggcacaatacaacagccgaagaaattgaggattggggttcca
gtgagaagcgattttagcgaatttataaaagtcgaatgggatcagcagagcaatgagcct
attgtttcaggcttctctgcagaggttttccttgcagtgcatgatatattaccatttccc
cttccgtatgaattcataccctttatgaatgaaagtagtaggaagagtgccgggacttac
gatgatattcttcggcaaatcgaacatcagaaatttgatgcagtggttggagatacaacg
atagtggcttatcgctcatcatatgtagatttcaccttgccttactcggaatcaggcata
acaatggtggttttgatgaaacgcgatgagagggataacatgtggattttcttgaagcca
ctaagcccgaaactttggttagtgactggagtagccttctttgtcacaggtttagtggta
tgggtgcttgaacaccgtacaaacacagagtttaggggaacaccagagcaacaactgggc
acagttatttggttctccttctcaacactggtctttgcacatagggagaggccagagaac
aacctaacaaaatttgtcttgatcatatggatatttgtggtacttattatatctcagagt
tacactgctagcttagcctcaatgctaacagtacagcggatgcatcccgcatttgtttat
gtcacagagatcaagaggaataattactttgttggacacccgaaagattcttttgtgaaa
gatttccttaaaaaagaaatacatttcaatgacacgatgttgagggaatataacactcca
gaggagtttcacgatgcgttgtctagaggatctgataatggtggtgtcgctgctatcttc
gatgaaattccctacgttagacgcttccttaacgacaagtaccgctgctctaaatttcaa
atggtaggaccaacctatcaaaccgatggatttggctttgccttcccacttaactcccca
ctagtctctcatatctcaagagcaatcttgaatgtcactgaagatcatgataaaacggaa
gcaattaagagtaaaagctttggtagggaaatcacctgtgaagatcgaggagctgaaacc
tcttcaggtggtctaaggttgtctagcttcgcgggcctcttccttatctctggagttgct
tccatatcttcgctcctgatatatatcattaggttccttttctcaaattatcctgcttcg
aacacaatgcatgaagaacaatccatgtggctgagaattcttgaggtagcaaagcgtttt
gaccagaaagatccctccgtccatcatcttaggcgagctgaatctagagttcaccctgtc
acaggtcctgaaagtattggagcctcacctgagactggcaacgtgcatgaaatgacttcc
aatgaaggagccgaagatgttggagaaaatcaaaaccatgacaatcttacctcggggaat
agtggtacaaattttattgcctccaatgcagatactgttgcccctaacactccggaaata
aaccgagcttcacctgatactgcctatgtgcatgaaatgacttccgatgaaggagccgaa
gttgttgttggggatcaaaaccgcggcaatcgtacctcagtgaacagtggtacaaatact
aacacaatgttgcccacaaaaatcagctgtacatga
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