Populus trichocarpa (black cottonwood): 112323612
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Entry
112323612 CDS
T01077
Name
(RefSeq) metacaspase-1 isoform X2
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
112323612
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
112323612
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GFIT
Motif
Pfam:
Peptidase_C14
zf-LSD1
Motif
Other DBs
NCBI-GeneID:
112323612
NCBI-ProteinID:
XP_024438179
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Position
12:complement(13156597..13172161)
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AA seq
372 aa
AA seq
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MYMLVNCSNCHTPLQLPPGANSNSICCAICHAITYIVDPRSAPPPPALSYSSSSQYQHYP
PQPHPFQVVPSPFSHAPPGPPPAVHGPKRAVICAVSYKNTKNELKGCINDAMCMKYLLVN
RFNFPGSSIIMLTEEESDPYRRPTKSNMRLALSWLVQGCQPGDSLVFHFSGHGSQKKDYN
GDELDGYDETLCPTDFETQGMIVDDEINAVIVKPISHGVKLHAIIDACHSGTVLDLPFLC
RMDRSGKYVWEDHRPRSGVWKGTSGGEVISFSGCDDDQTSADTSALSKITSTGVMTYSFI
QAIERGHGTTYGSMLNAMRATIRKTINELGGGIVTTLISMLLAGGNFSGGITQEPQLTAS
EPFDVYSKPFSL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgttagtcaactgttcaaactgccacacccctttgcagcttccaccaggagcc
aactccaactccatctgctgtgccatctgccatgccatcacctacatagttgatcctcgc
tctgccccaccaccgcctgctctatcttactcatcctcgagccaataccaacattaccct
ccccaacctcatccttttcaagtggttccatcaccattcagtcatgcgcctcctggacca
ccacctgctgtccatggcccaaagcgtgctgtgatttgtgcggtgtcttataagaatact
aagaatgaactcaaagggtgcattaatgatgccatgtgcatgaagtatttgttggttaat
aggttcaacttccctggatcctccatcatcatgctcactgaggaagagagtgatccttat
aggcggccaacgaaatccaacatgagattggcattgtcatggctcgtgcaaggatgtcag
cctggagattcattagtgtttcatttttccggtcatggttcgcagaagaaggattacaat
ggagatgagttggatggatatgatgaaacactttgtccaacagattttgaaactcaagga
atgattgttgatgatgagatcaatgcagtaattgtcaagcctatttcccatggtgttaag
cttcatgccatcattgatgcttgccatagtggcactgtgctggatttaccgtttctctgc
agaatggataggagcggcaagtatgtttgggaagatcatcgccctcgatcaggagtatgg
aaagggacaagtggtggggaagtgatctccttcagtggctgcgatgatgatcaaacctct
gcagacacttcggctctatccaagatcacttcaacaggtgtaatgacttattcgttcatc
caagcaatcgagcgcggacatggaactacatacggcagcatgctaaatgcaatgcgggct
accatccgtaagacgatcaatgagctcggtggtggtattgtgacaacacttatctcaatg
ctattagcaggggggaatttcagcggagggatcacacaggaaccacagttaactgctagc
gaaccatttgatgtgtattcaaaacctttctccttgtaa
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