Populus trichocarpa (black cottonwood): 112323812
Help
Entry
112323812 CDS
T01077
Name
(RefSeq) membrin-11
KO
K08496
golgi SNAP receptor complex member 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112323812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
112323812
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
112323812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
CRISPR_Cse1
ARGLU
SpoVR
Motif
Other DBs
NCBI-GeneID:
112323812
NCBI-ProteinID:
XP_024439092
LinkDB
All DBs
Position
13:4669993..4673032
Genome browser
AA seq
225 aa
AA seq
DB search
MEGGGGTLSEIYQSAKKLLMRAQDGIERLERLENSTSSGGLDSPELSFVVKKDISQVLSL
CADMDRLWRSVQAKPQRDLWRRKVELVAEEAGSLKESLDRYFARNQRRMKEAQERAELLG
RANGDSAHVLRIFDEEAQAMQSVHNSKRMLADSISTGAAILSKYSEQRERLKRAQRKALD
VLNTVGLSNAVLRLIERRNRFDRWIKYFGMLITLVILYFLVRSSG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaggagggacactatcggaaatataccagagtgcgaagaagttgctaatg
agagcacaagatgggatcgagagactggagcgactggagaactcgacttctagtggagga
ttagattcacctgagctatctttcgttgtcaagaaggatatctctcaggttctttctctt
tgtgccgatatggatcgtctctggcgctctgttcaagccaaacctcaacgcgatctctgg
agaagaaaggtggagctagtagctgaagaggctgggtcattgaaagagagtttggatagg
tattttgcaaggaatcaaagacggatgaaggaagctcaggagagagcagagttgcttgga
agagctaatggtgattcagctcatgttttgagaatattcgatgaagaagcacaagcaatg
cagtcagttcataattcaaaaagaatgctggcagattcaatatcaactggagcagccatt
ctttccaaatattcagaacaaagggaacgcttaaagagggcacaacgcaaggcattggat
gtgcttaatacagtggggctctccaatgctgtactgaggctgatcgagaggcgcaaccgt
ttcgatagatggatcaaatattttggaatgcttattacccttgtcatcttgtattttctc
gttaggtcaagtggttga
DBGET
integrated database retrieval system
