Populus trichocarpa (black cottonwood): 112324117
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Entry
112324117 CDS
T01077
Name
(RefSeq) protein IWS1 homolog 1
KO
K17498
transcription factor SPN1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
112324117
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112324117
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
112324117
NCBI-ProteinID:
XP_052310399
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Position
1:complement(11051017..11056112)
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AA seq
513 aa
AA seq
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MGYEDDPYRDVDGEPLMDYDEMQSDGGGQSPEPHQNHILDELEDDIENWERGRSQTPVYD
TDKVGKPRKRLVKKGGDSGKESGSGSYVQPELVDDYEEDYVGFEKEESAGEGKYAKKFAK
DKDRTKFSKGENKFGGKGSGSKSGLKKGTATKLVAGKDDGEVKEMWDTIAGGDSEDDQEG
ARTVDDDNFIDDSGVDPAYQYGNDNEPHSPTDAPQAEEGEEDEEIKQLFKMGKRRKKNEK
SPAEIALLVENVMAELEVTAEEDADLNRQGKPAVNKLKKLPLLTEVLSKKQLQQEFIDHG
VLTLLKNWLEPLPDGSLPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVIMFLSK
SDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDMRNVDDDRAFRRPTVRRPANNSTGMESR
DGDLDLDISRERRSSQSSDRQHASRPDATPLDFVVRPQSRIDPEEVRACAKQVVQDQRRL
KMNKKLQQLKGPKKKQLQATKLSVEGRGMVKYL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgaagacgatccgtaccgcgatgtggacggagaaccgttgatggactacgac
gaaatgcaatctgatggcggaggccaatcaccggaaccacaccagaatcatatcttagac
gaattagaggatgatattgagaattgggagagggggaggtcacaaactcctgtgtacgac
acggataaagtaggaaaacctagaaaaagattggttaaaaaaggcggcgattcagggaaa
gagagtggcagtggtagttatgtgcagccagagttggttgatgactatgaagaggattat
gtagggtttgagaaggaagaatcggctggggaagggaagtatgccaagaaatttgcgaag
gacaaggacaggacgaagtttagcaaaggggaaaataagtttggagggaaaggaagcggg
tcgaaatcagggttgaagaaaggaacggcgacgaagttggtggctggaaaggatgatggc
gaagttaaagagatgtgggataccattgctggtggcgattctgaggatgatcaagaaggt
gctaggactgtagatgatgacaacttcatagatgacagtggtgtggatcctgcttatcag
tatggaaatgacaatgaaccacactctcctactgatgctcctcaggcagaggaaggtgaa
gaggatgaggaaatcaagcagctcttcaagatgggtaagagaaggaagaagaatgagaaa
agtcctgcagaaattgcattattagttgagaatgtcatggctgagcttgaggtcactgct
gaagaagatgcagacctcaataggcaggggaagccggcagttaataaactcaagaagttg
cctcttcttactgaggttctctcaaagaagcagctccaacaagagttcatagatcatgga
gtactaacgttattaaaaaattggctagaaccccttccagatggaagtttacctaatata
aatatccgtgctgcaattttgaggattttgactgattttccaattgatctggagcagtat
gatagaagagaacaattgaagaaaagtgggcttggaaaggttattatgtttttatcaaaa
tctgatgaggaaaccacatccaacagaaaacttgccaaggatttggttgataaatggagt
cggccaatatttaataagagtacaaggtttgaagacatgagaaacgttgatgatgatcgg
gccttcagaaggccaacagtgagaaggcctgcaaataattctaccggaatggaatctaga
gatggagatcttgatttagatatttcacgggaacggaggtctagtcaatcatcagacaga
cagcatgcatccaggccagatgcgacaccattggattttgtggtgcgtccccaatctagg
attgatcctgaagaagttagggcctgtgctaaacaagtagttcaagatcagcgtcgtcta
aagatgaataaaaagttgcagcagctaaagggaccgaagaagaagcaattgcaagctaca
aagcttagtgtggaaggtcgtggtatggtcaaatacttgtga
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