Populus trichocarpa (black cottonwood): 112324492
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Entry
112324492 CDS
T01077
Name
(RefSeq) transcription factor RAX2
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
112324492
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112324492
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112324492
NCBI-ProteinID:
XP_024443225
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All DBs
Position
16:10013449..10015545
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AA seq
331 aa
AA seq
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MGRAPCCDKANVKRGPWSPEEDAKLKEYMAKHGTGGNWIALPQKAGLKRCGKSCRLRWLN
YLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGS
INPDALRKPQQAAHFSSLLHATSLPSSPSTPLSPSPSFTCSNNSYNYTLARSFTEPISFS
SSPLSNNSFTTASMLQPQETFVGSMQNYQVKDNLIMFGGEASCSSSDGSCSNQMSHVKEE
YEHGDGANNNTGQVGLQNYLHNRVEDDQKLMVSSGFAGHDVLNGWTGKQIGLWEENPLDY
GLEEIKQLISTSSCNNFLFDENKTAEKAMYY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggctccttgctgtgacaaggccaatgtgaagagagggccttggtcgcctgaa
gaagacgcaaagctgaaggagtacatggcgaaacacgggacaggagggaattggattgct
cttccacaaaaggctggtcttaaaagatgtgggaaaagctgcagattaagatggctaaac
tatctcagacccaacattaaacatggggagttctctgatgatgaagataggataatctgc
agcctatatgccaacattggaagcaggtggtcaataatagcagctcagttgccaggcagg
acggataacgatataaaaaactactggaacaccaagctcaagaagaaactaatgggttcg
attaatcctgatgctctgagaaaacctcagcaagctgctcatttctcatctctccttcac
gctacatcattgccgtcttcaccatccactcccctgtcaccatcaccttcattcacatgc
agcaacaacagttataattacaccctagctaggtctttcactgaaccaatttcgttttca
tcaagtcctttgagcaataactctttcactactgcttctatgctacaaccccaagaaacc
tttgtgggatctatgcaaaattatcaagttaaagataatctcataatgtttggaggtgaa
gctagctgcagttcttctgacggaagttgcagcaatcagatgagccatgtcaaagaggag
tatgaacatggtgatggtgcaaataacaacactggacaggtgggcttgcaaaattatcta
cacaatcgggttgaagacgaccaaaagttgatggtttcaagtgggtttgctggtcatgat
gtacttaatgggtggactgggaagcaaatcgggttatgggaagagaatccattagactat
ggtctagaggagataaaacaacttattagcactagcagttgtaataactttttgtttgat
gaaaacaagacagcggaaaaggccatgtactactga
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