Populus trichocarpa (black cottonwood): 112325921
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Entry
112325921 CDS
T01077
Name
(RefSeq) organic cation/carnitine transporter 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
112325921
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
112325921
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
112325921
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
TMEM234
Motif
Other DBs
NCBI-GeneID:
112325921
NCBI-ProteinID:
XP_024448845
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Position
11:complement(16426080..16430618)
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AA seq
533 aa
AA seq
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MSVIPSSDPDLRSPLLSSLEEPARKPEKGPDVQKLTIDDMLQKHCGEFGTWQLRHFVLTC
LAWALEGFHTMVMIFADREPEFRCLGSGCDEMAKSVCGFEPGSWDWVGGAGSSTVAQWGL
VCGEKYKVGLVQAVFFGGCMIGAGTFGHLSDSTLGRKGSLTVVCLLNAVFGCLTALAPDY
WTYLLLRLLTGFSTGGVGLCAFVLATEPVGSSKRGAAGMSTFYFFSTGIAMLSGIAYIFP
SWRELYIASSIPSILFLVIVLPFISESPRWYLVRGRINEAMTLMRTIAKSNGKHLPDGVV
LALDEDVNESYVNDQSDKQGFATKEAITGSVIDVIRSPVTRVRLFLAVAINFMCSVVYYG
LSLNVVNLDTNLHLNVVLNAVAEMPAFTITALLLDKFGRKPLTIGTLWFSGFFCFAGSLM
GGVGIWKVVRMICGILGIFGMAGTYNLLFIYTAELFPTVVRNVALGCATQSAQMGAILAP
FIVVMGGALPFAVFASCGFVGGLLAFYLPETLNRPLYDTITGMKEGEGGLSGV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcataccctcatcggacccggacctccggtcacccttgctatcttctttagaa
gaaccggcaaggaaacccgagaagggaccagacgttcaaaagctaacaatagatgacatg
ttacagaaacattgtggtgaatttgggacatggcaattacgtcactttgtgttaacatgc
ttggcttgggcgcttgagggcttccatactatggtgatgatatttgctgaccgcgagccg
gagtttaggtgtcttggttcgggttgtgatgagatggctaagagtgtttgtgggttcgaa
cctggttcgtgggattgggttggtggtgcggggagctcaacggtggctcagtgggggttg
gtttgtggagaaaagtacaaggttgggttggttcaagctgttttctttggtggctgcatg
attggtgctggaacatttggtcatctctcggactctacgctaggaagaaaaggctccttg
acagtagtttgcttactaaatgctgtgtttggttgcttaacagcattagccccagactac
tggacctatctcctacttcgtctcctcaccggtttcagcactggtggcgttggcctctgc
gcctttgttcttgctaccgagcctgtaggatcctcgaaacgtggtgcggctggcatgtcc
acattctattttttctcaactggaatagcaatgctgtcaggtatagcttacattttcccc
tcttggcgggagctgtacattgcctcgtctatcccctctatccttttccttgtcattgtt
cttccttttatctctgagtccccgcgttggtaccttgttcgtgggaggatcaatgaagca
atgacattaatgaggaccattgctaaatctaatggaaaacatcttcctgatggagttgtc
ttggcccttgatgaagatgtaaatgaaagttatgtcaatgaccaaagtgacaagcaaggt
tttgctacaaaagaagcaataactggttctgtaattgacgtaattcgctcaccagtcacc
cgtgttcgcctgtttttagcagtagcaatcaacttcatgtgctcagttgtctactatggc
cttagcctgaatgttgtcaaccttgataccaaccttcacctcaatgtggtgcttaatgca
gtggctgaaatgccagcattcactataacagcacttttgttggacaagtttggaaggaaa
ccattgacaatcgggactctatggttcagcggctttttctgctttgcagggagtttgatg
ggaggtgttgggatatggaaagtggtgaggatgatttgtgggattttgggtatttttggt
atggctgggacatataatttgctgtttatatacacagcggagttgtttcctacagttgtt
agaaatgtagcccttggttgtgcaacgcaatcagcacaaatgggggcaatattggcaccc
ttcatcgtagttatgggtggtgcattaccatttgcagttttcgcaagttgtggttttgta
ggaggattgcttgcattttacctgccagagacgctaaatcggccattgtatgacacgatc
actggaatgaaggaaggagaaggtggtttgtcaggtgtgtga
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