Populus trichocarpa (black cottonwood): 112326053
Help
Entry
112326053 CDS
T01077
Name
(RefSeq) protein NRT1/ PTR FAMILY 5.10
KO
K26562
MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
112326053
Transporters [BR:
pop02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
112326053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTR2
MFS_1
AmoC
YLR157C-C
Motif
Other DBs
NCBI-GeneID:
112326053
NCBI-ProteinID:
XP_024449059
LinkDB
All DBs
Position
13:complement(11600669..11603522)
Genome browser
AA seq
569 aa
AA seq
DB search
MPSSDTQTPLLHEAVDGCVDYNGRPVYRSISGGWRSAFFIIGVEVAERSAYYGISSNLIT
YLTGALGQSTATAAENVNVWSGTTMLLPLLGAFIADSFLGRYRTIVVASCIYILGLSLLT
LSAVLPSSRDSGCQTADAISLCSPDPRQVILFFFSLYIVAIGQGGHKPCVQAFGADQFDG
QHPEESKAKSSFFNWWYFSMNSGMVVALLILNYIQDNLNWGLGFGIPCIIMVGALIVFLL
GTKTYRYGIKTAERSAFLRIGQVFVEAVRNWRTNSSAIDCREEEALGIVPHQCSEQFKFL
NKALLTPNGSKEDGKVCSIGEVEEAKAVLRLVPIWTTCLIYGIVFAQSSTFFTKQGATMD
RSISPGLDVPAASLQSLISLSIVFLIPFYDRVLVPTARAITRKPSGITMLQRIGTGIFLS
ALSMVLSAVVEMKRLKTAREYGLVDLPNTTIPMSVCWLVPQYIVYGAADVFAMVGLQEFF
YDQVPSELRSVGLSLYLSIFGVGSFLSSFLISGIEKATGGDGHGSWFADNLNRAHLDYFY
WLLAGLSVVQLVAFLYFSKSYIYNREGTR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttctgacacacaaactcccctcttacacgaagctgttgatggctgcgttgac
tacaatggccgccctgtttacaggtccatctctggtggatggcgatcggcttttttcata
ataggtgtggaagttgcagagaggtcagcgtattatgggatatcttccaacttaataact
tatttgacgggagcgcttggccagtcaactgctactgctgcagagaatgtaaatgtctgg
tcaggaacgacgatgttacttcctctgttgggtgcatttattgctgattctttccttggt
agatacaggactattgttgttgcttcctgtatttacattttgggactgagcttgttgact
ctgtcagcagtgcttccttcttctagagattctggctgccaaactgctgatgctatcagc
ttgtgctctcctgatccccgacaagtaattttattcttcttttctctctatatcgtagca
attggtcaaggaggtcacaagccgtgtgttcaggcttttggagctgatcagtttgatggg
caacatcccgaggaaagcaaagccaaaagctcattcttcaattggtggtatttttctatg
aattcagggatggtggtagcgctgttaatcttgaactacatccaagacaaccttaattgg
ggacttggatttggaatcccatgtattataatggttggtgcacttattgtcttcttactt
ggaactaagacatataggtatggtatcaaaacggcagagagaagtgcatttctgagaatt
ggccaggtatttgttgaagctgtaaggaattggcgaactaattcttctgccatagattgc
agggaagaagaagctcttggcatcgtacctcaccaatgttccgagcaattcaagtttctc
aacaaagccctgcttaccccaaatggctcaaaggaagacgggaaagtttgtagcattggt
gaagttgaagaagctaaggcagtacttaggcttgttcccatatggactacatgcttgata
tatggtattgtttttgcacagtcctcgactttctttactaagcaaggagcaaccatggat
agatcgatttcaccaggtcttgatgttcctgcggcatcacttcaatccctcatttccctt
tccattgtttttctcattccattctatgaccgagtccttgttcctacggcaagagctata
accaggaaaccttcaggcattacaatgcttcagagaattggaactgggatatttttatct
gctctgtctatggttctttctgctgttgttgagatgaagagactgaaaactgctcgtgaa
tatggactagttgatctgccaaatacaacaattccaatgagcgtttgctggttagttcca
caatatatcgtgtatggagctgcagatgttttcgccatggttggtctccaagaatttttc
tacgatcaggtcccaagtgaattgaggagtgttggtctttcactctaccttagtatcttt
ggtgtaggaagctttctaagcagttttcttatctctggcattgaaaaagcaactggtggg
gatggtcatggcagctggtttgctgataacctgaatcgggctcatcttgattacttttat
tggctactggctgggctaagtgttgtacagttagttgctttcctgtacttttcaaagtct
tacatatataacagggaaggcactagataa
DBGET
integrated database retrieval system
