Populus trichocarpa (black cottonwood): 112326438
Help
Entry
112326438 CDS
T01077
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112326438
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
112326438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
112326438
NCBI-ProteinID:
XP_024449824
LinkDB
All DBs
Position
2:20144504..20147649
Genome browser
AA seq
857 aa
AA seq
DB search
MTTLSPLLAITPLCFCNCGSVESSKSIHYVCKTKKSRPTRRFGRMDVGKDSRLLFARSRV
AAQPTEQMMFTSSNPLVDQLKEVSTYRFRTEIGGHVKISVGKINGKYAVYVEVSSLELGA
SDSISLMLIWGIYTSDSSCFMPLDSSSHARTRETPLLQNSCARFATELEFEAKQTPFYLS
FFLKPTSSVVEIRNHNKSNFCVPIGFDSGYPTPLGLSFSTDGSMNFAFFSRNAAGCVLCL
YDDSTSGKPALELDLDPYVNRSGDIWHASLEGAWTFLSYGYRCKGAALQSDADKFDAGRV
LLDPYSKIIINSVTDNVSGLLPKYLGRLCKEPVFDWSDDVPPHLEMEKLVVYRVNVMRFT
KDNSSQISSDAAGTFAGLIEKLSHFKNLGVNAVLLESIFPFDEQKGPYFPCHFFSPSNVY
GPSNGSVAAISSMKEMVKRLHANGIEVLLEVVFTHTAEAGALQGIDDSSYYCTSITTGLD
SQNALNCNHPIVQRVILDSLQHWVTEFHIDGFCFINALSLLRSFGGEYLSRPPVVEAIAF
DPLFSKTKIIADCWDPKELEAKETAFPHWKKWAEMNTKFCYDIRNFLRGEGLLSDLATRL
CGSGDIFSSGRGPAFSFNFITRNFGLPLVDLVSFSGDELASELSWNCGEEGPTNKTTILE
RRLKQIRNYLFVLFVSLGVPVLNMGDECGQSSGGSTSYGSRKPFDWNALSTGFGIQTTQF
ISFLSSLRMRRSDLLQKRNFLKEENIDWHGSDQNPPRWEDPSCKFLAMTLKVDNPGSGLS
SESSHVEGDMFIAFNAAGRSESVTLPEVPEGMAWHRLVDTALPFPGFFSNDSEPVIRQPY
EMKSHSCILLEANIHDD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctttctcccttacttgcaataaccccattatgcttctgtaactgtggatcc
gtagaatcatctaaatcgattcattatgtctgtaaaactaaaaaatccagacccacaagg
cggtttgggaggatggatgttggtaaagattcgagattgttgtttgctagatcaagagtt
gctgcccagccaactgagcagatgatgtttacttcaagcaatccattagttgaccaacta
aaggaagtttcgacttatcgatttcggacggaaattggtggtcatgtcaaaatttctgtt
gggaagataaacgggaagtatgcagtttatgttgaagtttcatccttggaattgggtgct
agtgatagtattagtctgatgcttatctggggcatatacacgtctgattcgtcatgtttc
atgcctcttgactcatcctctcatgccaggaccagagagactccgctcttacagaattct
tgtgctaggtttgctactgagttggagtttgaagctaaacaaacccccttctacctctca
ttttttctcaaacctacatcaagtgttgtggaaatcaggaatcataacaagtctaatttt
tgtgttccgattggatttgattctggttatccaactccacttggtctttccttttctact
gatggttccatgaattttgcatttttttcaaggaacgcggcgggttgcgttctatgtttg
tatgatgatagtacatcaggcaagcctgccttagagctcgatctagatccatatgttaat
cgatcaggtgatatctggcatgcctcactggaaggtgcatggacttttctgagctatggt
tatcgatgtaaaggagctgctcttcagagtgacgcagataaatttgatgctggccgtgtt
cttttggatccatattctaaaattatcattaattccgtcacagataatgtatctggcctg
ctgcctaagtatctgggacgattatgcaaagaacctgtttttgattggagtgatgatgtt
cctcctcacttggaaatggagaaactagttgtttatcgggtgaatgtgatgcgttttaca
aaagacaactctagccagatatccagtgatgctgcagggacctttgctggtttgattgag
aagttaagtcattttaagaatcttggtgtgaatgcagtcctattagagtcaatatttccg
tttgatgagcaaaaggggccgtattttccatgtcatttcttttcaccatcaaacgtttat
ggtccttctaatggctccgtggctgccattagctcgatgaaagagatggtaaagagattg
catgccaatgggatagaagttttgctggaagttgttttcacccatactgctgaagctgga
gcattacaaggaattgatgactcatcctactattgcaccagcattactacaggtttggac
tcacaaaatgctttgaattgtaatcatcctatcgtccaaagggtgattctggatagtcta
cagcactgggttactgagtttcacatagatggtttctgtttcataaatgctttatctctg
ttgaggtcgtttggtggtgaatatttgtctcgtcctcccgttgttgaagcaatagccttt
gatccattgttctcaaagacaaagatcattgcagattgttgggatcccaaagaactggag
gcaaaggaaactgcctttcctcattggaagaaatgggctgaaatgaatacaaaattttgt
tacgatataagaaattttttgaggggtgagggtcttcttagtgacctcgcaacacggctt
tgtgggagtggggacatcttttctagcggacgaggcccagccttctctttcaattttatc
accaggaactttggacttcctcttgtggacttagtcagcttcagtggcgatgagttagct
tcagaattaagttggaattgtggagaagaaggacccacaaacaaaaccactatccttgaa
agacgactgaaacaaatccgtaactatctctttgttttgtttgtttcacttggtgttcca
gttctaaacatgggagatgagtgtggccaatcttctgggggttccacttcatatggtagc
agaaaaccttttgattggaatgcgctgtcaacaggttttggtatccaaaccacacagttc
atctcatttttgagttccttgagaatgaggcgaagtgacctccttcagaagagaaacttt
ttgaaggaagaaaatattgactggcatggaagtgaccagaatcccccaagatgggaagat
ccatcctgcaagttccttgccatgacactgaaggttgacaacccagggagtggattgagc
tctgaatcttcccatgtagagggtgacatgttcattgctttcaatgcagcgggacgctca
gagagtgtcactctacccgaagtccctgaagggatggcatggcatcgcttggttgataca
gctcttccattcccagggttcttctcaaatgatagtgagcctgtcattaggcagccttat
gaaatgaaatctcacagctgcatactgcttgaagccaacatccatgatgattga
DBGET
integrated database retrieval system
