Populus trichocarpa (black cottonwood): 112326620
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Entry
112326620 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC112326620
KO
K05291
GPI-anchor transamidase subunit S
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
112326620
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GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
112326620
NCBI-ProteinID:
XP_024451085
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Position
2:complement(23631170..23636700)
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AA seq
608 aa
AA seq
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MAEEITESPNDPPPETPPTPPSEPEFDSKTMRRTKPGLKRLFLTFTVLVSFLLGFPFLFK
SVEIYRSPLPFHDIDSLSNDVVSNPFLFPCHFQAILVPSDPKSSSIDLNLDELELSIRSK
ITKLASKGIASQCGACTNNFTLSLTLDDGDCTQSSSKFYKCGAIRAVDLDFGDDESVDEA
LESAGLDSGGKVYSVVVVVNGDGVDGVKVVVGKYRHAWIVGRDWGVEEVAERLAEIFVRV
FVNGGREEGLIHGEFMPVGADGRIVLSFNLLNADPSDWTYDWDFRKIDETLLAPMIDALG
PIANISVESQVLYHTPKFSVSSWDEKLGGYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKI
LQFVVYVPSAKECPLLLQLPNGEISKTNAFISPMWGGVMVWNPQSCSRDSDSELLVRHIM
SPEDLQKVFEVFVGQFRQLFGLKSGSLHVGAMGTYSLLASENGFTEWELDVLSRQHTCFN
IHSSATTLGSLSKLVQSLPRMIIMDEIGKQVKFSLEAAKFARVNASLGFYDASAVSSRQA
RSLAEDAFFHPSIMSVSYYSFEHCFAVYSPFFLPVSMLVLPAALREWRRYKQEKAKYLLW
KAKEKVAS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaatcaccgaatctccaaatgacccaccaccagaaacaccgccaactcca
ccatctgaaccggaattcgactcgaaaaccatgcgcagaacaaaaccggggttgaagcgc
ctcttcctcactttcacagtccttgtctccttccttttaggtttcccttttttattcaaa
tccgttgagatctaccgctctccgcttcctttccacgacatcgatagcctctcaaacgac
gtcgtctccaatccattcctctttccttgccatttccaagccattcttgtcccctccgat
cccaaatcttcttcaattgacctaaatttagacgagcttgaactctcaattcgctctaag
attaccaaattagcctccaaaggaatagcatctcaatgcggagcctgcaccaacaacttc
actctctcgctaaccctagacgacggggattgcacgcaatcttcgtctaagttttacaag
tgcggcgcgatccgagccgttgatttggatttcggtgacgatgagagtgtcgatgaagct
ttggagtctgctggtttggattctggcgggaaagtgtatagtgtggtggtggtggtgaat
ggagatggtgtggatggagtgaaagtggttgttgggaagtaccggcacgcttggattgta
gggagggattggggagttgaagaagtggcagagagattggcggagatttttgtcagagtg
tttgtgaatggcgggagagaggaagggttgattcatggggagtttatgcctgttggtgct
gatgggaggattgttctttcgtttaacttgctcaatgcggatcccagtgattggacttac
gattgggattttcggaaaatagatgaaactctgttggctcctatgattgatgcgttggga
ccgatagcaaacataagcgtggagagccaagttttgtaccatactccaaagttttcagtt
tcttcttgggatgaaaaattaggtggctatatttttagtacaaaggatcttcctttcttt
gtgaactcaaatgagtggcacttggatacttctattgctgctggtgggcgatcgaaaatc
ttgcaatttgtggtatatgtgccatctgcaaaggaatgtccccttcttctgcagcttcca
aatggagagatttctaaaacaaatgcctttatatctccaatgtggggaggtgtcatggtg
tggaatcctcaaagctgttcaagggattcagacagtgagcttcttgttaggcatataatg
tctcctgaggaccttcagaaagtttttgaagtttttgtggggcaattccggcaacttttt
ggtctaaaatctggtagtcttcatgtgggtgcaatgggcacgtacagtcttttagccagt
gaaaatggcttcacagaatgggaattggatgtcttgtcacggcaacatacgtgttttaat
attcactcaagcgccacaacgctgggatctctttcaaaattggttcaatcattgcctagg
atgattattatggatgagataggaaagcaggtaaaattttcccttgaagcagcaaaattt
gctcgagttaacgcctctcttggattttacgatgcttcagctgtgtcctcaagacaagca
agatctttggcagaggatgccttcttccacccatcaatcatgtctgtcagctactactcg
tttgagcactgttttgcagtgtactcgccattcttcttgccagtttcaatgcttgtcctc
cctgctgcattaagagaatggagaagatacaagcaagaaaaggcaaagtacttgctatgg
aaggctaaagaaaaggtggcatcttag
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