Populus trichocarpa (black cottonwood): 112327272
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Entry
112327272 CDS
T01077
Name
(RefSeq) importin subunit beta-3-like
KO
K20222
importin-5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112327272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
112327272
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112327272
Pre-60S particles
112327272
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
ARM_ARMC5
Proteasom_PSMB
DUF1195
NEW1_HB
UME
Motif
Other DBs
NCBI-GeneID:
112327272
NCBI-ProteinID:
XP_024455393
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Position
4:complement(6825507..6827650)
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AA seq
614 aa
AA seq
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MASTTSSPLPQDSATPPSMSLPSLLRAKLRPTRGNPNSAINWSPPPTSRLRPPSLGSQRS
PLLSPPTQSSLNSTRDYLRSKAMEILESPDTLPLTCLIEELNFPETSTDLMYAQNLLNYL
KNNYLTSFCFCLVSFYKTCGSEFGNCKEYAFDILCQILTEGKEGPCQETSFLDKEIKSAI
LDFLNTESSIKNLNKIRDFVAKIATKEVRLGNDWPELLEFVYESLDSDSEEKVKYAVSLL
YKLIPHCAVEDLVVSPDSFYDSLVDIFDSDYMSLEVQVEAVLTSNRFLLYWTNRSNHDRY
SVLMIQIVETISTLVEHKSDKDVQAVVKELTVLTKEKPWTLSSQFDYVVLSVLRILGEVE
LQDKTRILALEFVIALAEERVQGRQMLLGSQFAIPKFLEKILLLLANLKDDSEWGTAESD
TQNLHSVRCLDRIVAALGGEVLMRYFPRLFAINFCAEDWQSRHAAVLSLGIVAERCSSLK
ESKHSWDQMAGRIIRSVKEDMHPCVRLTALYTIKQFSKNLKPEFQDQYRDQVLPALTKAM
DDFNYPRVQVQAYSALFEFTSNCTPSILNPYLKEIVTKLLKELREEKHMIKGETLKVLSA
VAYSSQVLLDSLLI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactacttcatcgccactacctcaggattcagctacaccaccatcgatgtcc
ctgccttcgctcttgagggccaaactccgtccgacccgaggaaacccaaattcagccata
aactggtcaccaccaccaacatcaagactaaggccaccatcattgggctcacagaggtca
ccattactttcaccgccgacgcagtcatccctgaattcaaccagggactatctcagaagt
aaagccatggaaatcctggaatcaccagataccttacctcttacttgtcttattgaagag
cttaacttccctgaaacctccactgatttaatgtatgcccaaaacctcttgaattacctt
aaaaacaattaccttacgtccttctgtttttgccttgtttctttctataagacttgcggc
tctgaatttggaaactgcaaggagtatgcctttgatattctatgccagattctgacagaa
ggtaaggaaggaccttgtcaagaaacctctttcttggataaagaaatcaaatctgcaatt
cttgattttttgaatacagagagttcaataaagaatttgaataagattcgcgattttgtc
gccaagattgccactaaagaagtaagacttggaaatgattggcctgagcttcttgagttt
gtttatgaatctttggattctgattctgaagaaaaagtgaagtatgctgtttctttgctt
tataagttgattccgcattgtgctgtcgaagatctggttgttagtcctgattccttttat
gatagtttagtggatatatttgattctgattatatgagtttagaggtacaggttgaggca
gttctgacctcaaatcgttttctcttgtactggacgaatcgatcgaatcatgataggtat
agtgtccttatgattcaaatagtggagaccatttccactttggttgagcataaatcagac
aaagatgtacaggcggtagttaaggaattgactgtgttgacaaaggagaagccatggact
ttgagtagccaatttgattatgtagttctatctgtgcttaggatcctaggtgaagtcgaa
ctccaagacaaaacaagaattcttgcactagaatttgtgattgctttagctgaagaaaga
gttcagggtcgacagatgttgctaggatcgcaattcgcaatcccaaagtttcttgaaaag
attttgcttctgctagcaaatttgaaagatgactcagaatggggaactgcggagagtgat
acacagaatctgcattcggtaaggtgcttggatagaattgtagccgccttaggtggggaa
gttcttatgaggtatttcccccgattatttgcaattaatttttgtgctgaagattggcag
agccgccacgctgcggttctttcccttggcattgttgcagagagatgctcaagtctaaag
gagtcgaaacacagttgggatcaaatggcaggaagaattataagaagtgtcaaagaagac
atgcacccttgtgtgcgtttgacagctttatatacaattaaacaattttccaagaatttg
aaacctgaatttcaagaccagtatcgtgaccaagttcttcctgcattaacgaaagccatg
gatgatttcaattatccccgcgttcaggtgcaagcttattcagcattgtttgaattcacc
tcgaactgcactccaagtattctaaatccttacctaaaagaaattgtcaccaaattgctc
aaagaattaagggaagaaaagcacatgatcaagggtgaaactttgaaagtattgtcagca
gttgcctattcatcacaggtacttcttgatagtctcttaatctaa
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