Populus trichocarpa (black cottonwood): 112328418
Help
Entry
112328418 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit B-5
KO
K08065
nuclear transcription Y subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
112328418
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
112328418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
TFIID_20kDa
DUF3152
Motif
Other DBs
NCBI-GeneID:
112328418
NCBI-ProteinID:
XP_024462603
LinkDB
All DBs
Position
8:16189998..16191067
Genome browser
AA seq
150 aa
AA seq
DB search
MVDNVGAGASSDDGGVKLEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFIS
FVTGEASEKCRKERRKTVNGDDVCWAMGALGFDDYAGPLRRYLQRYREIEGDRANQEKPA
NANNTSIADQEKEAPPSSSSSYRNNQGIRM
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggtcgataatgttggtgctggtgcttcaagtgacgacggcggcgtcaagctggagcaa
gacaggttgttgcctatagccaacgttggacggatcatgaagcaaattctgccggctaac
gcgaaaatctccaaagaagccaaggaaacgatgcaagaatgtgcttcagagtttattagc
tttgtcaccggtgaagcatccgagaagtgtagaaaggaaaggcgcaaaaccgtgaatgga
gatgatgtctgctgggctatgggagccctaggttttgatgactacgccgggccactaaga
aggtatcttcagagatatagagagatagaaggagatagagctaatcaagagaagcctgct
aacgctaataatactagtattgctgatcaagaaaaagaagcaccaccgtcctcctcctcg
tcatatagaaataatcaaggaatcaggatgtag
DBGET
integrated database retrieval system
