Populus trichocarpa (black cottonwood): 112329128
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Entry
112329128 CDS
T01077
Name
(RefSeq) plant UBX domain-containing protein 4
KO
K14012
UBX domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112329128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
112329128
Membrane trafficking [BR:
pop04131
]
SNARE
SNARE associated proteins
Others
112329128
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEP
UBX
Motif
Other DBs
NCBI-GeneID:
112329128
NCBI-ProteinID:
XP_024467422
LinkDB
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Position
11:complement(1027086..1030154)
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AA seq
305 aa
AA seq
DB search
MASRDKKPAKPSSSRAGGIRTLSDLNRRSGPDSDSDDEDAPQEYYTGGEKSGMLVQDPTK
GNDVDAIFNQARQLGAVEGPLENINQSSSSSSFSGTGRLLSGETVPSAPQQPEAVVHNIV
FWTNGFTVNDGPLRSLDDPENASFLESIRKSECPKELEPADRRSSVHVNLIRRDQKCPEP
ERQRHVAFQGVGRTLGSSSTALATEPTADSAPLNSAPTPFMGLVVDETLPSTSIQLRLAD
GTRMVAHFNNHHTVNDIRSFIDASRPGAALNYQLQLMGFPPKLLTDPTQTIEQAGLANSV
VIQKF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaagggacaagaaaccagcaaaaccctcaagcagtcgagccggaggtatccgt
actctctccgatctgaaccggcgttccgggcctgactctgacagcgacgacgaagatgct
cctcaagagtactacactggtggagagaaaagtggtatgcttgtccaagatcctacaaag
ggtaatgacgtggatgcaattttcaatcaagctagacagcttggtgctgttgaagggcct
ttggagaatattaatcaatcttcaagctcaagtagctttagtggaactggtagattactc
tcaggggagactgtaccatctgctcctcaacaacctgaagctgttgttcacaatattgtt
ttctggacgaatggtttcactgtaaatgatggccctttgaggagtctggatgatcctgaa
aatgcatctttcttagagagcatcaggaagtccgagtgtccgaaggagcttgaaccagcg
gatagaaggtcctcagttcatgtcaatttgattaggagggatcaaaagtgcccagaacca
gagaggcagcgccatgttgcattccaaggtgtagggagaactctaggaagcagcagtact
gcacttgcaactgaaccaacagctgattctgctcctctgaactctgctccaacccctttt
atgggcctggttgtggatgaaacactgccatcgacttcaattcagcttaggctggctgat
gggacacgcatggtggcccactttaataatcatcacacagtcaatgacattcgatccttc
atagatgcttccaggcctggggctgctcttaattatcaactgcagttgatggggttccca
cctaagcttcttactgatccaacacagacaatagagcaggcaggccttgccaattcagtt
gttattcagaaattctag
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