Populus trichocarpa (black cottonwood): 127903951
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Entry
127903951 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
127903951
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
127903951
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127903951
NCBI-ProteinID:
XP_052309459
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Position
6:26258639..26265357
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AA seq
951 aa
AA seq
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MIMKEYSLNPVLSIFFFLSLMILFLEMAVAQNTTSTIPVNVGVVLDLASLDANIALSCIN
MALSDFYASHGDYKTRLVLNTRDSKKDVIGAAGAALDLIKNVEVQAILGPTTSMQANFVI
DLGEKAQVPIISFSATSPSLTSIRSSYFLRATQNDSAQVNAISAIVQAFGWREAVPIYID
NEYGEGIIPYLTDALQEVDARVPYRSVISPSATDDQIVEELYKLKTMQTRVFIVHMYRSL
GTRLFTKAKEIGMMSEGYVWIMTDGLSVDFLSSPNHSVTDTIQGVLGIKPYVPRTKELEY
FRARWKRKFLRDKPNKIDAELNIYGLLAYDATTALALAVEKAGTTNFGFQKANVSSNSST
DLATLGISLNGPNILRALSTTSFKGLTGDYLFVDGQLQSPAFQIVNVNGNGGRRIGFWTP
TEGLVKTLNPRINKRMNSTATSRVSTVIFPGDTTAVPKGWEIPTNEKKLKIGVPVKDGFS
ELVAVTKDPGSNTTTFTGFCIDVFDAVVKALPYALPYEYIPFANSDGEPAGTYNDLAYQV
YLKNYDAVVGDITIVYNRSLYIDYTLPFTESGVSMIVPIADNNSKNAWVFMKPLTWDLWV
TSFLFFVFIGFAVWVIEHRINDDFRGSASDQAGTSFWFSFSTMVFAQRERVVSNLSRAVI
IIWCFVVLILTQSYTASLASLLTVEQLQPTVTDVRELIKKGEYVGYQKGSFVLGLLLDLG
FDKSTLMVYSSAEECHHLFSKGSGNGGIAAAFDELAFIKLILSRYCSKYTMIDPKFKTGG
FGFVFPKGSPLVPDISRAILNVTEGDQMKQIEGAWFGKKSTCPDSSPSISSNSLSLKSFW
GLFLIAGLAALLALIIFVVMFVYRERNVLRSSDSTASIWSRIENFFRIFIQRDSTSSTFR
QSDLKDRNGISLPPMCAPSPSDYSVHTEYPANRSSASYDSSPNREAPQEVV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaagaatactctttaaatcctgttctatctatctttttcttcctttctttg
atgattttgttcttagaaatggcggtggcccagaacacgacatctacaatcccagtgaat
gtaggagtggttcttgacttggcttcattggatgccaatattgctttgagctgcatcaac
atggccctttcagacttctatgcctctcatggtgactacaaaactagactggtcctcaac
accagggactcgaagaaagatgttattggtgcagctggtgcagccctggacctgataaaa
aatgtggaagtgcaagcaatcttagggccaacaacatcaatgcaagccaattttgttatt
gaccttggagaaaaagctcaggtgccaattatatctttttctgcaacaagtccttctctt
acttccatcaggagttcatatttcttgcgagcaacacaaaatgattcagctcaagtgaat
gccataagtgctatagttcaagcctttggatggagagaagcggtgcccatctacattgac
aacgaatatggagagggaatcataccttatttaactgatgctctgcaagaagtcgatgct
cgagtgccctaccggagtgtcatttctccatcggccactgatgatcaaattgttgaggag
ctttataagttgaagacaatgcaaactagagttttcattgtgcatatgtatcgctctcta
ggcactcggcttttcaccaaagcaaaagagattggaatgatgagtgaaggctatgtttgg
atcatgactgatggtctgagtgttgatttcttgagttcaccaaatcattctgtcaccgat
actatccaaggagtattgggtataaaaccttatgttccaagaacaaaagagcttgaatat
tttcgagctcggtggaagaggaaattcctacgagataagccaaataaaattgatgctgag
ttgaacatttatggactactggcctatgatgccactacagcattggccttggcagttgag
aaagccggcactacaaattttggcttccaaaaggcaaatgtttctagcaactcatcaaca
gatcttgcaactcttggcatctctttaaatggtccgaacattctgcgagctttatcgacc
actagtttcaaaggccttacaggagattacctttttgttgatgggcagttgcaatcacca
gcttttcagatagttaatgtgaacggaaatggaggaagacggattggattttggacgcca
acagaaggacttgtgaaaacactgaatccgagaataaataaacgtatgaattcaactgct
acttccagagtttcaactgtaatttttcctggggatacaactgcggttcccaagggttgg
gagattcccacaaacgagaagaagttgaaaataggagtgcctgtgaaggatggcttcagt
gagttagtagcagtaacaaaagatcctggttccaacaccacaacattcaccggattctgc
atagatgtttttgatgctgtagtcaaagcattgccttatgctttgccttatgagtatatc
ccctttgccaactctgatggcgaacctgctggaacttacaacgatctggcctatcaagtg
tacttgaagaattatgatgccgtggttggagacataactattgtctacaacaggtccttg
tacatcgactataccttgcctttcacagaaagtggtgtctccatgattgttccgattgca
gacaacaacagcaaaaacgcatgggtcttcatgaaacctttgacatgggacctttgggtg
accagttttttgttctttgttttcattggatttgcggtctgggttattgagcacagaata
aatgatgattttcgagggtcagcttcagatcaagctggcactagtttctggttttccttc
tcaactatggtttttgcacaacgggagagagtggttagcaacttgtctagggcggtgata
atcatctggtgttttgttgtgttgatcctcacgcagagttacaccgccagtttagcaagc
ctacttaccgtcgagcagctgcagcctacagttactgatgtgagggagctcattaagaaa
ggggagtatgtgggctaccagaagggttcttttgttctaggactcttgttagacttgggg
ttcgacaagtccacgctcatggtgtatagttctgcagaagaatgccaccatcttttctcc
aaaggaagtggaaatggtggtattgccgcagctttcgacgaactggcatttataaagctc
attctgtcaagatattgctccaaatataccatgattgatcctaaatttaaaaccggcggt
tttggctttgtcttccctaaaggttctcctctagtgcctgatatatcgagggcaatttta
aatgtgaccgagggagatcaaatgaagcaaatagagggtgcatggtttggcaaaaaaagc
acttgtccagattccagcccctcaatttcatctaatagccttagtctcaagagtttctgg
gggttatttttaattgcaggactggctgcattgttagctctcattatcttcgtagtcatg
tttgtttaccgagaaagaaacgtcttgaggtcctctgattccacagcttcaatatggagt
agaattgaaaacttctttagaattttcattcaaagggactcgacatccagtactttcaga
caaagtgatctgaaagatagaaatggcatcagtctgccacctatgtgtgcgccaagccca
tcagactattcagtccacacggaatatcctgccaatcgatcttctgcaagctatgattct
agtccaaatagggaagcacctcaagaggtagtatag
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