KEGG   Populus trichocarpa (black cottonwood): 127904015
Entry
127904015         CDS       T01077                                 
Name
(RefSeq) photosystem II CP47 reaction center protein-like
  KO
K02704  photosystem II CP47 chlorophyll apoprotein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00195  Photosynthesis
pop01100  Metabolic pathways
Module
pop_M00161  Photosystem II
pop_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    127904015
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:pop00194]
    127904015
Photosynthesis proteins [BR:pop00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    127904015
SSDB
Motif
Pfam: PSII
Other DBs
NCBI-GeneID: 127904015
NCBI-ProteinID: XP_052301378
LinkDB
Position
11:complement(14431215..14433322)
AA seq 508 aa
MGLPWYHVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGLGIWVSDPYGLTGKVQS
VNPAWGVEGFDPFVLGGITSHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRIVGTGLAENQSLSE
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAIGWLGHPLFRDKEGRELCVRRMP
TFFETFSVVLVDGDGIVRADVPFRRVESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
ARRAQLGEIFELDRATLKSDGVFRSSPKGWFTFGHASFALLFFFRHIWHGSRTLFRDVFA
DIDPDLDAQVEFGAFQKLGDPTTRRQVV
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgggtttgccttggtatcatgttcataccgtcgtattgaatgatcccggtcgtttgctg
gctgtccatataatgcatacagctttggttgctggttgggccggctcgatggctctatat
gaattagcagtttttgatccttctgaccccgttctcgatccaatgtggagacaaggtatg
ttcgttatacccttcatgactcgtttaggaataaccaattcatggggtggttggagtatt
acaggaggaactataacgaatccgggtatttggagttatgaaggtgtggctggggcgcat
attgtgttttctggcttgtgcttcttggcagctatctggcattgggtgtattgggatcta
gaaatcttttgtgatgaacgtacaggaaaaccttctttagatttgcccaagatctttgga
attcatttatttctctcaggagtggcttgttttgggtttggtgcttttcatgtaacagga
ttgtatggtcttggaatatgggtgtctgatccttatgggctaaccggaaaagtacaatct
gtaaatccagcgtggggtgtggaaggttttgatccttttgttctgggaggaataacctct
catcatattgcagcagggacattgggcatattggcgggcctattccatcttagtgtccgc
ccgccccaacgtctatacaaaggattacgtatgggaaatattgaaaccgtgctttccagt
agtatcgctgctgtcttttttgcagcttttgttgttgctggaactatgtggtatggttca
gcaactacccccattgaattatttggtcccactcgttatcaatgggatcaaggatacttc
caacaagaaatatatcgaatagttggtactgggctggctgaaaatcaaagcttatccgaa
gcttggtctaaaattcctgaaaaattagccttttatgattacatcggaaataatccggca
aagggtggattgttcagagcaggttcaatggataacggggatggaatagctattgggtgg
ttaggacatcctctatttagagataaagaagggcgtgagctttgtgtacgtcgtatgcct
actttttttgaaacattttcggttgttttggtagacggagacggaattgttagagccgat
gttccttttcgaagggtagaatcgaagtatagtgttgaacaagtaggtgtaactgttgag
ttctatggtggtgaactaaatggagtcagttatagtgatcctgctactgtgaaaaaatat
gctagacgcgcacaattgggtgaaatttttgaattagatcgtgctactttgaaatccgat
ggtgtttttcgtagtagtccaaagggttggtttacttttggacatgcttcgtttgccctg
ctcttcttctttagacacatttggcatggctctcgaaccttgttcagagatgtttttgct
gatattgatccagatttagacgctcaggtggaatttggagcattccaaaaacttggagat
ccaactacaagaagacaagtagtttga

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