KEGG   Populus trichocarpa (black cottonwood): 127904143
Entry
127904143         CDS       T01077                                 
Name
(RefSeq) photosystem II CP43 reaction center protein
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00195  Photosynthesis
pop01100  Metabolic pathways
Module
pop_M00161  Photosystem II
pop_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    127904143
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:pop00194]
    127904143
Photosynthesis proteins [BR:pop00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    127904143
SSDB
Motif
Pfam: PSII
Other DBs
NCBI-GeneID: 127904143
NCBI-ProteinID: XP_052302157
LinkDB
Position
13:complement(15596198..15599005)
AA seq 487 aa
MKAFVLGWRLKISLMKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLS
GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVI
DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
LLGIGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVS
VDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIA
CCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPT
GEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNS
VGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPV
LSMTPLN
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaaggcattcgtgcttggatggcggctcaagatcagcctcatgaaaaccttatattcc
ctgaggaggttctaccccgtggaaacgctctttaatggaactttagctttagctggtcgt
gaccaagaaaccacaggtttcgcttggtgggccgggaatgcccgacttatcaatttatcc
ggtaaactgctgggagctcatgtagcccatgctggattaatcgtattctgggccggagca
atgaacctatttgaagtggcccatttcgtaccggagaagccaatgtatgaacaaggatta
attttacttccccacctagctactctaggttggggggtgggtcctggcggggaagtcata
gacacctttccatactttgtatctggcgtacttcacttaatttcctctgcagtattgggc
tttggcggtatttatcatgcacttctaggacccgagactcttgaagaatcttttccattt
tttggttatgtatggaaagatagaaataaaatgacaacaattttaggtattcacttaatc
ttgctaggtataggtgcttttcttctagtattcaaagctctttattttgggggcgtatat
gatacctgggctccgggggggggagatgtaagaaaaattaccaacttgacccttagccca
agtgttatttttggttatttactaaaatctccttttggaggagaaggatggattgttagt
gtggatgatttggaagatataattggggggcatgtatggttaggttccatttgtatactt
ggtggaatctggcatatcttaaccaaaccctttgcatgggctcgccgtgcacttgtatgg
tccggggaggcttatttgtcttatagtttaggcgctttagctgtttttggtttcattgct
tgttgctttgtctggttcaataataccgcttatcctagtgagttttacgggcccactgga
ccagaagcttctcaagctcaagcttttacttttctagttagagaccaacgtcttggggct
aacgtgggatccgctcaaggacctaccggcttaggtaaatatctaatgcgttcgcccacc
ggagaagttatttttggaggagaaactatgcgtttttgggatctgcgcgctccttggtta
gaacctctaagaggtccaaatggtttggacttgagtaggttgaaaaaagacatacaacct
tggcaagaacgacgttctgcggaatatatgacccatgcgcctttaggttcattaaattcc
gtaggtggcgtagctaccgagatcaatgcagtcaactatgtctctcctagaagttggtta
gctacctctcattttgttctcgggttcttcctattcgtaggtcatttatggcacgcggga
agggctcgtgcagctgcagcaggatttgaaaaaggaattgatcgtgattttgaacctgtt
ctttccatgactcctcttaactag

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