Populus trichocarpa (black cottonwood): 127904144
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Entry
127904144 CDS
T01077
Name
(RefSeq) ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00630
Glyoxylate and dicarboxylate metabolism
pop00710
Carbon fixation in photosynthetic organisms
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00532
Photorespiration
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
127904144
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
127904144
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
127904144
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
127904144
NCBI-ProteinID:
XP_052302158
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Position
13:complement(15574873..15576701)
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AA seq
482 aa
AA seq
DB search
MSCREGLMSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA
GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQFIAYVAYPLDLFEEGSV
TNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT
IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETG
EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
HRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDF
VEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMD
TL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtagggaggggcttatgtcaccacaaacagagactaaagcaggtgttggattc
aaggctggtgttaaagattataaattgacttattatactcctgactatgaaaccaaagat
actgatatcttggcagcattccgagtaactcctcaacctggagttccgcccgaggaagca
ggggccgcagtagctgctgaatcttctactggtacatggacaactgtgtggaccgacggg
cttaccagtcttgatcgttataagggacgatgctacgacatcgagcccgttgctggagaa
gaaaatcaatttattgcttatgtagcttaccccttagacctttttgaagaaggttctgtt
actaacatgtttacttccattgtgggtaatgtatttgggttcaaagccctacgcgctcta
cgtctggaggatttgcgaattcctcctgcttatgttaaaacttttcaaggcccacctcat
ggtatccaagttgaaagagataaattgaacaagtatggtcgccccctattgggctgtact
attaaacctaaattggggttatccgctaagaattacggtagagcagtttatgaatgtcta
cgcggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgt
tggagagatcgtttcttattttgtgccgaagcactttataaagcacaggctgaaaccggt
gaaatcaaagggcattatttaaacgctactgcaggtacatgcgaagaaatgatcaaaagg
gctgtatttgccagagaattgggagttcctatcgtaatgcatgactacttaacaggggga
ttcaccgcaaacactagtttggctcattattgccgagataatggtttacttcttcacatc
catcgcgcaatgcatgcagttattgatagacagaaaaatcatggtatacactttcgtgta
ctagctaaggcattacgtatgtctggtggagatcatattcactctggtaccgtagtaggt
aaacttgaaggggaaagagacataactttgggttttgttgatttactgcgtgatgatttt
gttgaaaaagatcgaagccgcggtatttatttcactcaagattgggtctctctaccgggt
gttctacccgtggcttcggggggtattcacgtttggcatatgcctgctctgaccgagatc
tttggagatgattccgtactacaattcggtggaggaactttagggcacccttggggaaat
gcacccggtgccgttgctaatcgagtagctctagaagcatgtgtacaagctcgtaatgag
ggacgtgatcttgctcgtgagggtaatgaaattatccgtgaagctagcaaatggagccct
gaactagctgctgcttgtgaagtatggaaggagattaaatttgaattccaagcaatggat
acgttgtaa
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