Populus trichocarpa (black cottonwood): 127904146
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Entry
127904146 CDS
T01077
Name
(RefSeq) cytochrome f
KO
K02634
apocytochrome f
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00195
Photosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09102 Energy metabolism
00195 Photosynthesis
127904146
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pop00194
]
127904146
Photosynthesis proteins [BR:
pop00194
]
Photosystem and electron transport system
Cytochrome b6/f complex [OT]
127904146
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Apocytochr_F_N
Apocytochr_F_C
Motif
Other DBs
NCBI-GeneID:
127904146
NCBI-ProteinID:
XP_052302160
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All DBs
Position
13:complement(15567546..15570749)
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AA seq
320 aa
AA seq
DB search
MQTRKTLSWIKEEITRSISVSLMIYIITGAYISNAYPIFAQQGYENPREATGRIVCANCH
LANKPVGIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAP
PDRISPEMKEKIGNLSFQSYRPAKKNILVIGPVPGQKYSEITFPILSPDPAAKKDAHFLK
YPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGGYEITITDAPEGRQVID
SIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQ
IFLVLKKKQFEKVQLSEMNF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactagaaagaccctctcttggataaaggaagagattactcgctccatttccgta
tcgctcatgatatatataataactggggcatacatttcaaatgcatatcccatttttgca
cagcagggttatgaaaatccgcgcgaagcaactggtcgtattgtatgcgcgaattgtcat
ttagctaataagcccgtgggtattgaggttccacaagcggtacttcctgatactgtattt
gaagcagttgttcgaattccttatgatatgcaactaaaacaagttcttgctaatggtaaa
aagggagctttgaatgtgggggctgttcttattttacctgaggggtttgaattagcccct
cctgatcgtatttcgccagagatgaaagaaaagataggtaatctctcttttcagagttat
cgccccgctaaaaaaaatattcttgtgataggtcccgttcctggtcaaaaatatagtgaa
atcacctttcctattctttctccggaccctgctgctaagaaggatgctcacttcttaaaa
tatcccatatacgtaggcgggaacaggggaaggggtcagatttatcccgacgggagcaag
agtaacaatacggtttataatgctacagcagcgggtatagtaagcaaaatcatacgaaaa
gaaaaaggggggtacgaaataactataacagatgcgccagaggggcgtcaagtgattgat
agtatccccccaggaccagaacttcttgtttcagaaggcgaatccatcaaactcgatcaa
ccattaacaagtaatcctaatgtgggcggatttggtcagggagacgcagaaatagtactt
caagacccattacgtgtccaaggccttttgttcttcttggcatccgttattttggcacaa
atctttttggttcttaaaaagaaacagtttgagaaggttcaattgtccgaaatgaatttc
tag
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