Populus trichocarpa (black cottonwood): 127905046
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Entry
127905046 CDS
T01077
Name
(RefSeq) DNA topoisomerase 6 subunit B-like isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
127905046
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
127905046
DNA replication proteins [BR:
pop03032
]
Prokaryotic type
DNA Topoisomerases
127905046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Stanniocalcin
Motif
Other DBs
NCBI-GeneID:
127905046
NCBI-ProteinID:
XP_052307060
LinkDB
All DBs
Position
3:complement(20884293..20890124)
Genome browser
AA seq
673 aa
AA seq
DB search
MEIGGSSESQNETKKGKSKTPRKPKESLLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
LVENSLDSAEAISELPVVEITIEEIGKSKFNSMIGLVDRERVDAQLYDDYETAKAREKRL
AKEARAQEVQAKNASLGKKVKEQSTMKGMKGRGEASFYRVTCKDNGKGMPHDDIPNMFGR
VLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKAQSYISFCRLDIDIHRNI
PHIHLHEKRNNDDCWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFRFISDAP
DKNVTIKFARRTDVMPPVPLETKHHPSSVDLLLIKRLIAETSKQNLLQFLQHEFVNIGKS
LAERLIGEMGPEFSPKMVVKSLTDQQIVRINQLFRQAKFDDPTGDCLSPAGEYNLRLGII
KELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGADVV
TRTALKRINWGSYKINQTQDKIGVFVSVVSTKIPFKGTGKEYIGDDINEIATAVKSAIQQ
CCIQLKSKIIKKMLAREQQERKRNLSRYIPDATNAVYDVLKYMSQSHASKKKRYSGEEAE
ILSNITANLITKETIKEKLAEHVEKVDYEMALEYATQSGVTEEPREDIFIQTLDPENKFI
EFQSPIFVFRLVC
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaggaagcagtgaaagccaaaatgaaacaaagaaaggcaaatcaaagact
ccaaggaaacccaaagaaagccttctcaaacaaaaatctccagctgaatttttcgcagag
aacaagaacattgccggctttgataatccagggaaatctctttatactacagtgagagaa
cttgtagaaaattcgcttgattcggcggaagcgatatcggaacttcctgtcgtagaaatt
acgattgaggagatagggaaaagtaagtttaattcaatgattggtcttgttgatcgagag
cgtgttgatgcgcaactttatgatgattacgagacagctaaggctcgtgagaaaagattg
gcgaaggaagctcgtgctcaagaagtgcaagcgaagaatgcttctcttgggaagaaagta
aaagaacaatcaactatgaagggcatgaagggtcgaggtgaggcctcattttacagagtc
acatgcaaggacaatggaaaaggaatgccacatgatgatatcccaaatatgttcggacga
gttttgtccgggacaaagtatggtctcaagcagactcgtggcaagtttggtcttggtgcc
aaaatggcattgatatggtctaaaatgagtacagggcttcctatagagatctcgtcatca
atgaaggcccaaagctatatttcattctgcaggctggatatagatattcatcggaacatt
cctcacattcatttacatgaaaaacggaacaatgatgattgttggcatggagctgaaatt
caagttgttattgagggaaattggacaacttatcgttccaagatattgcattacatgcgg
caaatggctgttatcactccttatgcccaatttcttttcagatttatatcagatgcacca
gataagaatgttactataaaatttgcacggagaactgatgtgatgcctccagttcctctc
gagacaaaacaccatccatcatctgttgatttactgctgatcaaacgcctcattgcggaa
acttcaaaacagaatcttttgcagtttctacagcatgaatttgtaaacataggaaagtca
cttgctgaacgattaattggggaaatgggtccagaatttagcccaaaaatggttgtaaaa
tctctgactgatcagcagatagttcgcatcaatcagttgtttcgccaagccaagtttgac
gaccctactggtgattgtcttagtcctgcaggggaatacaatcttcgtcttggaattata
aaggagctgcatccagatatggttgcaacttattcaggcagtgctcaagtatttgagggt
cacccatttattgtagaagctggtgtcagtgtgggtggaaaggatgttaagcaaggcttg
aatatatttcgatttgcaaaccgcattccacttctatttgagcaaggtgcagatgttgtc
accaggactgcacttaagagaatcaattgggggagttacaagattaaccagacgcaggac
aaaattggtgtctttgtcagtgtcgtgagcacaaaaatcccctttaaagggactggcaag
gagtatattggagatgatattaatgagatagctacagctgtgaagtctgccattcagcaa
tgctgcatccagctaaaatccaaaattataaagaaaatgctggcccgtgagcaacaggag
agaaaacgaaatctaagcaggtatattcctgatgctaccaatgctgtatatgatgttttg
aaatacatgtcacagtcacatgcatcaaagaagaagcgttacagcggtgaggaagcggaa
atacttagcaacataacagctaatttgataacaaaagagacaatcaaggaaaagcttgct
gagcatgttgaaaaggtggactatgaaatggcattggaatacgcgacacaaagtggagtg
accgaagaaccaagagaagatatattcatccaaacccttgatcctgaaaataagttcatc
gaattccaaagtcccatctttgttttcagactagtatgttag
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