Populus trichocarpa (black cottonwood): 127905051
Help
Entry
127905051 CDS
T01077
Name
(RefSeq) protein NRT1/ PTR FAMILY 5.4-like
KO
K26562
MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
127905051
Transporters [BR:
pop02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
127905051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
127905051
NCBI-ProteinID:
XP_052307102
LinkDB
All DBs
Position
3:19944494..19951395
Genome browser
AA seq
565 aa
AA seq
DB search
MDIVVAPIMTRNGQEETKVVSALRKPTKGGWNSAIFIIFVEVSLRFAYYGLAGNLITYLT
NDLHQSTSTAIKNVNTWVGVSAIFPIFGAIVADSLLGRFKTILLASAIYFLGMILLTLSV
SVIPMRYREAVFFIALYILAVGEGGHKPCVQTFAADQFDEEKPEEKAAKSSFFNWWYLGI
VAGGSSAVLLVIYIQDNVGWTAGFGMLTGALGVALFIFLAGIKRYRKQAPVKSPFTMVAQ
VFVAAMRKRRVIETHQGLGICYEAVGTDVEGQPRNSRTLAATNQYRFLDKAMIIDNLDAS
SKPRNPWRLCSLNQVEEVKLVLRLLPIWLSCFMFTAVLVQTHTLFIKQGSTMIRSIGPNF
QVPPASFQSLVGLTILFTIPIYDRIFVPAARKLTGHRSGITMLQRIGIGLFLSIVEMVVA
AQVEAKRVSIAREHGLMDTPKATIPMSVWWILPQYMISGISDVFTVVGLQELFYDQMPES
MRSLGAAAHISVIGVGSFINTAIITAVQAITARSIGILLGDNLNRAHVDYFYWVMAALSA
LNFCVYLWIASGFVYKKVEGEEEPR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgtcgttgctccaatcatgactcggaatggccaggaagagaccaaggtcgtc
tctgccctacgaaaacccaccaaaggtggctggaattctgccatcttcattatctttgtt
gaggtgagtctgaggtttgcctactatggtttggctggtaacctcataacatacctcaca
aatgatcttcatcagtccacttccacagccatcaagaatgtcaacacatgggttggtgta
tcagcaatcttccccatcttcggagcaattgtagctgactctttacttggccgcttcaag
accatccttcttgcctcagccatttacttcctcgggatgattctgttgaccttatcggtc
tcggtaattcctatgcgttaccgtgaggctgtgttctttattgctctctacatactagct
gttggtgaaggtgggcacaagccatgtgtgcagacctttgcagcggatcagtttgatgag
gagaagccagaggagaaggcggccaagagttcattcttcaattggtggtacttaggtata
gtggctggcggatcttctgctgtcctgttggtcatttacattcaggacaatgtgggatgg
acagcaggatttggaatgctgacaggagcattaggggtggcattgtttatattcttagca
ggaattaagagatacaggaaacaagctccagtgaaaagccctttcaccatggtggcacaa
gtatttgtggcagccatgcggaagcggcgcgtgatcgagactcaccaaggtttgggcatt
tgttatgaggcagtagggactgacgtggaaggtcaaccccgcaacagtcgaactttggct
gccacaaatcaatacaggttcttggacaaggccatgatcattgacaatttggatgcctca
agcaagccaagaaacccttggcgtttatgctcactcaaccaggtggaagaagtgaagctt
gtgctgcgcctcctccccatttggttaagttgcttcatgttcactgcggtattagttcaa
acacacactcttttcatcaagcaaggcagcacaatgatcagatcaataggaccaaacttc
caagttccaccagcatcattccaaagcctcgtaggcctcacgatcctctttaccattccc
atctatgaccgcatcttcgtccctgcggcaagaaaattaaccggacaccgctctggtata
actatgctacaacggattggcattggcctgttcctgtctatagttgaaatggtagtagca
gctcaagtagaggctaaaagggttagcattgcaagagagcacggtctaatggacacccca
aaagcaacaatcccgatgagtgtctggtggatactcccacagtacatgatcagcggcata
tcagatgtgttcacggttgttggattgcaggaactgttctacgatcaaatgccggaatcg
atgagaagcctcggagctgcagcccatataagtgtgatcggagttgggagctttatcaac
actgctattataactgcggtgcaggccattacagcaaggtccatcggcattttacttggt
gacaatctaaaccgtgcccatgttgactacttctactgggtgatggcagcattgagtgct
ttaaatttttgtgtttacttgtggattgctagtggttttgtgtacaaaaaagttgaaggt
gaggaggaaccacgatag
DBGET
integrated database retrieval system
